y
Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s329_23V6.1 |
Family | GH89 |
Protein Properties | Length: 807 Molecular Weight: 92170.1 Isoelectric Point: 5.3284 |
Chromosome | Chromosome/Scaffold: 329 Start: 272173 End: 279224 |
Description | alpha-N-acetylglucosaminidase family / NAGLU family |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH89 | 96 | 790 | 0 |
PEIRISGTTGVELCAGLHWYLKHWCNGHISWDKTGGAQLHTVHRPGFLPRLQGDTLTIQRPVDWNYYQNVVTSSYSYVWWTWERWEKEIDWMALQGINLP LAFTGQEAVWQKVFQSETFNLTKAELDDYFGGPGFLAWARMGNLKRWGGPLPQKWLDQQLQLQIKILARMRELGMTPVLPAFAGNVPAAITKKYPSARVT RLGEWNTVNGDTRYCCTFLLDPKDPLFVDIGKAFILQQIKEYGGTQHIYNCDTFNENQPPTDDPSYISALGSIVYEAMSAADQDAIWLMQGWLFASDDKF WKPPQMKALLHSVPVGRMVVLDLFADVKPMWSRSDHFYGVPYIWCMLHNFGGNVEMYGRLDVVATAPIQAVTSSNSTMVGVGMCMEGIEQNPVVYDLMAE MAFHNATVVVEDWIEEYARRRYGELTAGARIAWKMLHESIYNCSDGIADHNGDVIVEFPDIDPKRSLFQIRPRQSLGQQILGHPQHIWYSPQDAAVALQY LLSSADALGLSKPYRYDVVDLTRQVLSKLANQLHSQVLDQFRMFNVEKMDNISSRLLELLSDMDDLLGASEEFLLGTWLESAKDLATSDEERKLYEWNAR TQITMWFDNTLDKPSPLHDYANKMWSGLTRDYYLPRASIYIKYLKQSLHENTSFAFQEWRREWIALTNEWQVASNLYPTVAKGDALEIATTLYEK |
Full Sequence |
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Protein Sequence Length: 807 Download |
MAVFVTLKIW FAYFLLVVVT FSDCHVPQYE TVLNKIQSEK APASTQERAS YDVLARLLPS 60 HLSSFEFRII TKEECGGKFC FLLQNHPSAG VYGGAPEIRI SGTTGVELCA GLHWYLKHWC 120 NGHISWDKTG GAQLHTVHRP GFLPRLQGDT LTIQRPVDWN YYQNVVTSSY SYVWWTWERW 180 EKEIDWMALQ GINLPLAFTG QEAVWQKVFQ SETFNLTKAE LDDYFGGPGF LAWARMGNLK 240 RWGGPLPQKW LDQQLQLQIK ILARMRELGM TPVLPAFAGN VPAAITKKYP SARVTRLGEW 300 NTVNGDTRYC CTFLLDPKDP LFVDIGKAFI LQQIKEYGGT QHIYNCDTFN ENQPPTDDPS 360 YISALGSIVY EAMSAADQDA IWLMQGWLFA SDDKFWKPPQ MKALLHSVPV GRMVVLDLFA 420 DVKPMWSRSD HFYGVPYIWC MLHNFGGNVE MYGRLDVVAT APIQAVTSSN STMVGVGMCM 480 EGIEQNPVVY DLMAEMAFHN ATVVVEDWIE EYARRRYGEL TAGARIAWKM LHESIYNCSD 540 GIADHNGDVI VEFPDIDPKR SLFQIRPRQS LGQQILGHPQ HIWYSPQDAA VALQYLLSSA 600 DALGLSKPYR YDVVDLTRQV LSKLANQLHS QVLDQFRMFN VEKMDNISSR LLELLSDMDD 660 LLGASEEFLL GTWLESAKDL ATSDEERKLY EWNARTQITM WFDNTLDKPS PLHDYANKMW 720 SGLTRDYYLP RASIYIKYLK QSLHENTSFA FQEWRREWIA LTNEWQVASN LYPTVAKGDA 780 LEIATTLYEK YADLIVDDQT PELGIR* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12971 | NAGLU_N | 2.0e-20 | 46 | 146 | 101 | + Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This N-terminal domain has an alpha-beta fold. | ||
pfam12972 | NAGLU_C | 9.0e-88 | 507 | 791 | 285 | + Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This C-terminal domain has an all alpha helical fold. | ||
pfam05089 | NAGLU | 2.0e-168 | 161 | 499 | 339 | + Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain. Alpha-N-acetylglucosaminidase, a lysosomal enzyme required for the stepwise degradation of heparan sulfate. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B) characterized by neurological dysfunction but relatively mild somatic manifestations. The structure shows that the enzyme is composed of three domains. This central domain has a tim barrel fold. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24942.1 | 0 | 9 | 791 | 71 | 866 | unnamed protein product [Vitis vinifera] |
GenBank | EEE59081.1 | 0 | 41 | 791 | 51 | 810 | hypothetical protein OsJ_10898 [Oryza sativa Japonica Group] |
RefSeq | XP_001782392.1 | 0 | 1 | 806 | 1 | 801 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002273084.1 | 0 | 9 | 791 | 6 | 801 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314048.1 | 0 | 30 | 791 | 30 | 804 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2vcc_A | 0 | 68 | 792 | 180 | 878 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2vcb_A | 0 | 68 | 792 | 180 | 878 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2vca_A | 0 | 68 | 792 | 180 | 878 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2vc9_A | 0 | 68 | 792 | 180 | 878 | A Chain A, Family 89 Glycoside Hydrolase From Clostridium Perfringens In Complex With 2-Acetamido-1,2-Dideoxynojirmycin |
PDB | 4a4a_A | 0 | 68 | 792 | 203 | 901 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |