y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.T177800.2 |
Family | GH1 |
Protein Properties | Length: 213 Molecular Weight: 23981.3 Isoelectric Point: 8.7461 |
Chromosome | Chromosome/Scaffold: 1686 Start: 4759 End: 6731 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 36 | 212 | 1.4013e-45 |
TKSPKSEEDIKAAYRELDFLFGWFANPLTYGDYPETMKAIVGHRLPKFTKEESALVKGSIDFLGVNYYTTNYAANNPAPNKINFSYTGDSQTILSTSKGG HPIGTPTALNWLFIYPKGIYDLMLYVRDKYKNPPVYITENGLADANNASLPVKEALKDGLRIRYLASHLQYLSKAIK |
Full Sequence |
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Protein Sequence Length: 213 Download |
MERNSFHLCS YNISYSFHLC SHNICYYTCV TAHANTKSPK SEEDIKAAYR ELDFLFGWFA 60 NPLTYGDYPE TMKAIVGHRL PKFTKEESAL VKGSIDFLGV NYYTTNYAAN NPAPNKINFS 120 YTGDSQTILS TSKGGHPIGT PTALNWLFIY PKGIYDLMLY VRDKYKNPPV YITENGLADA 180 NNASLPVKEA LKDGLRIRYL ASHLQYLSKA IK* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 8.0e-22 | 41 | 212 | 175 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 6.0e-25 | 23 | 212 | 190 | + beta-glucosidase | ||
TIGR03356 | BGL | 6.0e-26 | 41 | 212 | 174 | + beta-galactosidase. | ||
PLN02849 | PLN02849 | 5.0e-26 | 36 | 212 | 183 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 2.0e-37 | 31 | 211 | 183 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330884.1 | 0 | 28 | 212 | 271 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330885.1 | 0 | 28 | 212 | 271 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002334229.1 | 0 | 1 | 212 | 1 | 212 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002338830.1 | 0 | 33 | 176 | 1 | 144 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512142.1 | 0 | 28 | 212 | 271 | 454 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 30 | 212 | 268 | 450 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptq_A | 0 | 30 | 212 | 268 | 450 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_B | 0 | 30 | 212 | 268 | 450 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_A | 0 | 30 | 212 | 268 | 450 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptk_B | 0 | 30 | 212 | 268 | 450 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG225143 | 185 | 28 | 212 | 0 |
JG219912 | 185 | 28 | 212 | 0 |
GT179737 | 185 | 28 | 212 | 0 |
GT180908 | 184 | 29 | 212 | 0 |
GT176331 | 165 | 48 | 212 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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