y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00040514m |
Family | GH1 |
Protein Properties | Length: 197 Molecular Weight: 22541.5 Isoelectric Point: 9.641 |
Chromosome | Chromosome/Scaffold: 055132 Start: 4694 End: 5401 |
Description | beta glucosidase 16 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 4 | 195 | 0 |
YLGARLPRFTPEQARLVRGSYDFIGVNYYTTYFTTAVPPANKLRQSYDTDARANTSGFRNGVPIGKPEFVSVSFNYSAGLRELLLYTSRRYGNPVLYVTE NGIAEGNNATLPLAEALKDGHRIEFHAKHLQFVNHAIRDGANVKGYFMWTFMDCFEWGDGYLDRFGLIFIDRLNGLKRYRKESSYWIENFLK |
Full Sequence |
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Protein Sequence Length: 197 Download |
MAGYLGARLP RFTPEQARLV RGSYDFIGVN YYTTYFTTAV PPANKLRQSY DTDARANTSG 60 FRNGVPIGKP EFVSVSFNYS AGLRELLLYT SRRYGNPVLY VTENGIAEGN NATLPLAEAL 120 KDGHRIEFHA KHLQFVNHAI RDGANVKGYF MWTFMDCFEW GDGYLDRFGL IFIDRLNGLK 180 RYRKESSYWI ENFLKR* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK13511 | PRK13511 | 2.0e-26 | 25 | 189 | 174 | + 6-phospho-beta-galactosidase; Provisional | ||
TIGR03356 | BGL | 7.0e-28 | 9 | 189 | 187 | + beta-galactosidase. | ||
COG2723 | BglB | 1.0e-29 | 25 | 189 | 169 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02998 | PLN02998 | 8.0e-31 | 1 | 195 | 197 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 2.0e-45 | 7 | 196 | 190 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | A3C053 | 0 | 1 | 196 | 296 | 491 | BGL29_ORYSJ RecName: Full=Beta-glucosidase 29; Short=Os9bglu29; Flags: Precursor |
GenBank | EAZ09573.1 | 0 | 1 | 196 | 307 | 499 | hypothetical protein OsI_31852 [Oryza sativa Indica Group] |
GenBank | EEC84793.1 | 0 | 1 | 196 | 314 | 509 | hypothetical protein OsI_31851 [Oryza sativa Indica Group] |
RefSeq | NP_001063538.1 | 0 | 1 | 196 | 307 | 502 | Os09g0490400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002462569.1 | 0 | 1 | 196 | 310 | 505 | hypothetical protein SORBIDRAFT_02g028400 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 1 | 194 | 310 | 503 | 3 Chain 3, Human Rhinovirus 3 Coat Protein |
PDB | 3ptq_A | 0 | 1 | 194 | 310 | 503 | 3 Chain 3, Human Rhinovirus 3 Coat Protein |
PDB | 3ptm_B | 0 | 1 | 194 | 310 | 503 | 3 Chain 3, Human Rhinovirus 3 Coat Protein |
PDB | 3ptm_A | 0 | 1 | 194 | 310 | 503 | 3 Chain 3, Human Rhinovirus 3 Coat Protein |
PDB | 3ptk_B | 0 | 1 | 194 | 310 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL713967 | 197 | 1 | 197 | 0 |
FL858028 | 182 | 15 | 196 | 0 |
FL720070 | 173 | 25 | 197 | 0 |
CA196306 | 197 | 1 | 197 | 0 |
BM084748 | 197 | 1 | 197 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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