y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.T033400.1 |
Family | CE16 |
Protein Properties | Length: 184 Molecular Weight: 20769.1 Isoelectric Point: 8.2027 |
Chromosome | Chromosome/Scaffold: 35 Start: 10023 End: 10777 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 17 | 161 | 3e-23 |
KYLAEPLAKRLQRLYDHGGRKFLLSNSLPLGCRPFSISQEKPTTRCVERLNKLASEFNSYLPRMLKDLESTLSGSKFVLLDVYKVFEDVFSEPASYGITD ITHSCCPIDSMKHIPMCKDGEVCINRNQYAFFDAIHPTEVMNSIM |
Full Sequence |
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Protein Sequence Length: 184 Download |
MDLNKRLSSN GSLDMGKYLA EPLAKRLQRL YDHGGRKFLL SNSLPLGCRP FSISQEKPTT 60 RCVERLNKLA SEFNSYLPRM LKDLESTLSG SKFVLLDVYK VFEDVFSEPA SYGITDITHS 120 CCPIDSMKHI PMCKDGEVCI NRNQYAFFDA IHPTEVMNSI MVSRCLKESS ICKPFNLIEL 180 VKT* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00657 | Lipase_GDSL | 2.0e-10 | 23 | 161 | 145 | + GDSL-like Lipase/Acylhydrolase. | ||
COG3240 | COG3240 | 2.0e-12 | 26 | 154 | 129 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
PLN03156 | PLN03156 | 1.0e-20 | 19 | 167 | 156 | + GDSL esterase/lipase; Provisional | ||
cd01846 | fatty_acyltransferase_like | 2.0e-28 | 27 | 161 | 135 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
cd01837 | SGNH_plant_lipase_like | 4.0e-43 | 18 | 166 | 152 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_565021.2 | 3e-28 | 12 | 181 | 110 | 280 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
RefSeq | XP_002282047.1 | 5e-34 | 15 | 181 | 223 | 390 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315999.1 | 3e-28 | 15 | 181 | 192 | 348 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323791.1 | 0 | 1 | 183 | 1 | 183 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525953.1 | 2e-29 | 19 | 174 | 188 | 344 | zinc finger protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3evy_B | 0.004 | 57 | 96 | 11 | 52 | A Chain A, Crystal Structure Of A Fragment Of A Putative Type I Restriction Enzyme R Protein From Bacteroides Fragilis |
PDB | 3evy_A | 0.004 | 57 | 96 | 11 | 52 | A Chain A, Crystal Structure Of A Fragment Of A Putative Type I Restriction Enzyme R Protein From Bacteroides Fragilis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO109305 | 160 | 26 | 184 | 7.00005e-41 |
EC956640 | 171 | 15 | 184 | 5e-35 |
EC955154 | 168 | 15 | 181 | 1e-34 |
EC951774 | 168 | 15 | 181 | 1e-34 |
FS361818 | 169 | 11 | 177 | 2e-34 |
Sequence Alignments (This image is cropped. Click for full image.) |
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