y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00056114m |
Family | CE16 |
Protein Properties | Length: 387 Molecular Weight: 42815.7 Isoelectric Point: 6.6399 |
Chromosome | Chromosome/Scaffold: 081424 Start: 811 End: 3466 |
Description | SGNH hydrolase-type esterase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 130 | 364 | 6.2e-27 |
YASAAAGIISSSGSELGMHVSLTQQVQQVEDTYEQLSLALGEAAAANLFRRSVFFVSIGSNDFIHYYLRNASGVQMRYLPWEFNQLLVSTMRQEIKNLYN INVRKVILMGLPPVGCAPHFLEEYGSQTGECIDYVNNVVIEFNYALRHMSNEFISQHPDSMISYCDTFEGSVDILNNRERYGFVTTTDACCGLGKYGGLI MCVLPQMACSDASSHVWWDEFHPTDAVNRILADNV |
Full Sequence |
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Protein Sequence Length: 387 Download |
AASRPPPPLP LRRPPVLRHH RRRGLAVHAV PAPAPAPLVP ALFVIGDSTA DVSTNNYLGT 60 LARADREPYG RDFDTHRPTG RFSNGRIPVD YLAERLGLPF VPPYLEQNMR TGAGSVGLSN 120 VDGMIQGVSY ASAAAGIISS SGSELGMHVS LTQQVQQVED TYEQLSLALG EAAAANLFRR 180 SVFFVSIGSN DFIHYYLRNA SGVQMRYLPW EFNQLLVSTM RQEIKNLYNI NVRKVILMGL 240 PPVGCAPHFL EEYGSQTGEC IDYVNNVVIE FNYALRHMSN EFISQHPDSM ISYCDTFEGS 300 VDILNNRERY GFVTTTDACC GLGKYGGLIM CVLPQMACSD ASSHVWWDEF HPTDAVNRIL 360 ADNVWSGQHT KMCYPLDLQQ MVKLKL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00657 | Lipase_GDSL | 1.0e-9 | 178 | 364 | 193 | + GDSL-like Lipase/Acylhydrolase. | ||
COG3240 | COG3240 | 3.0e-14 | 44 | 366 | 330 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
cd01846 | fatty_acyltransferase_like | 2.0e-36 | 43 | 364 | 325 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
PLN03156 | PLN03156 | 3.0e-60 | 44 | 364 | 326 | + GDSL esterase/lipase; Provisional | ||
cd01837 | SGNH_plant_lipase_like | 8.0e-114 | 43 | 367 | 326 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN36303.1 | 0 | 35 | 386 | 42 | 393 | unknown [Zea mays] |
DDBJ | BAD21752.1 | 0 | 36 | 385 | 50 | 399 | putative GDSL-lipase [Oryza sativa Japonica Group] |
DDBJ | BAH91635.1 | 0 | 36 | 381 | 50 | 395 | Os02g0290900 [Oryza sativa Japonica Group] |
GenBank | EEC72945.1 | 0 | 94 | 385 | 118 | 409 | hypothetical protein OsI_06811 [Oryza sativa Indica Group] |
RefSeq | XP_002451978.1 | 0 | 41 | 386 | 47 | 392 | hypothetical protein SORBIDRAFT_04g011320 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO165797 | 233 | 153 | 385 | 0 |
DT939498 | 226 | 43 | 268 | 0 |
CK077842 | 178 | 208 | 385 | 0 |
DR819460 | 197 | 43 | 239 | 0 |
DT748794 | 260 | 124 | 383 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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