| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00050429m |
| Family | AA2 |
| Protein Properties | Length: 356 Molecular Weight: 38006.1 Isoelectric Point: 7.1029 |
| Chromosome | Chromosome/Scaffold: 069180 Start: 55 End: 1376 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 71 | 334 | 0 |
| KEQVAQLYDKHGNTAVSWLRALFHDCMVGSCDASLLLDTSAAAGISEKSAPRSFGMRNFKYVDAIKAALERECPGTVSCADVLALAARDGAAALGGPRVA MRTGRRDSRASRYAEVGRDIPNHNDSVSAVLSRFAALGVDAEGAVALLGAHSVGRVHCFNLVGRLYPSVDAGMDPAYGAYLRGRCPTADAKEDTRDVAYA RNDRATPMVLDNMYHKNLLARRGLLLVDQRLADDPRTAPFVARMAADNAYFHDRFAAALLTMSE | |||
| Full Sequence |
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| Protein Sequence Length: 356 Download |
| MGLLCPPKVV LQISIKNEDA GFEELKQPTS AAAALLLFSC FLATGDAANN GGGLRLGYYS 60 ASCPRAEDIV KEQVAQLYDK HGNTAVSWLR ALFHDCMVGS CDASLLLDTS AAAGISEKSA 120 PRSFGMRNFK YVDAIKAALE RECPGTVSCA DVLALAARDG AAALGGPRVA MRTGRRDSRA 180 SRYAEVGRDI PNHNDSVSAV LSRFAALGVD AEGAVALLGA HSVGRVHCFN LVGRLYPSVD 240 AGMDPAYGAY LRGRCPTADA KEDTRDVAYA RNDRATPMVL DNMYHKNLLA RRGLLLVDQR 300 LADDPRTAPF VARMAADNAY FHDRFAAALL TMSENNPLAA DEGEVRRDCR FVNSA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 1.0e-5 | 286 | 317 | 32 | + Peroxidase. | ||
| cd00314 | plant_peroxidase_like | 7.0e-15 | 68 | 334 | 273 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 5.0e-32 | 70 | 223 | 155 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 3.0e-40 | 51 | 353 | 316 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 8.0e-111 | 53 | 352 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC84057.1 | 0 | 35 | 355 | 7 | 330 | putative peroxidase [Oryza sativa Japonica Group] |
| GenBank | EAZ05247.1 | 0 | 35 | 349 | 7 | 326 | hypothetical protein OsI_27449 [Oryza sativa Indica Group] |
| GenBank | EAZ27428.1 | 0 | 35 | 344 | 7 | 319 | hypothetical protein OsJ_11374 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060737.1 | 0 | 63 | 355 | 3 | 295 | Os07g0694300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002439661.1 | 0 | 32 | 355 | 11 | 339 | hypothetical protein SORBIDRAFT_09g018150 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bgp_A | 0 | 53 | 353 | 8 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
| PDB | 4a5g_B | 0 | 51 | 353 | 1 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4a5g_A | 0 | 51 | 353 | 1 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1sch_B | 0 | 54 | 353 | 2 | 294 | A Chain A, Peanut Peroxidase |
| PDB | 1sch_A | 0 | 54 | 353 | 2 | 294 | A Chain A, Peanut Peroxidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL739729 | 233 | 44 | 276 | 0 |
| FE653560 | 217 | 140 | 356 | 0 |
| FE647805 | 217 | 140 | 356 | 0 |
| FL849325 | 219 | 44 | 262 | 0 |
| FL739729 | 19 | 11 | 29 | 0.081 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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