y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00010935m |
Family | AA2 |
Protein Properties | Length: 335 Molecular Weight: 35884.7 Isoelectric Point: 7.3361 |
Chromosome | Chromosome/Scaffold: 083567 Start: 576 End: 1965 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 51 | 313 | 5.60519e-45 |
EQVAQLYDKHGNTAVSWLRALFHDCMVGSCDASLLLDTSAAAGVSEKSAPRSFGMRNFKYVDAIKAALERECPGTVSCADVLALAARDGAAALGGPRVAM RTGRLDSRVSRYDEVGRDLPNHNDSVSAVLSRFAAVGVDAEGAVALLGAHSVGRVHCFNLVGRLYPSVDAGIDPAYGAYLRGRCPTADAREDTRDVAYAR NDRATPMVLDNMYYKNLLARKGLLLVDQRLADDPRTAPFVARMAADNTYFHDRFAAALLTMSE |
Full Sequence |
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Protein Sequence Length: 335 Download |
MRGLRSSSSL LVAAAALLLF CCCFTIGDAN GGLRLGYYSA SCPRAEDVVR EQVAQLYDKH 60 GNTAVSWLRA LFHDCMVGSC DASLLLDTSA AAGVSEKSAP RSFGMRNFKY VDAIKAALER 120 ECPGTVSCAD VLALAARDGA AALGGPRVAM RTGRLDSRVS RYDEVGRDLP NHNDSVSAVL 180 SRFAAVGVDA EGAVALLGAH SVGRVHCFNL VGRLYPSVDA GIDPAYGAYL RGRCPTADAR 240 EDTRDVAYAR NDRATPMVLD NMYYKNLLAR KGLLLVDQRL ADDPRTAPFV ARMAADNTYF 300 HDRFAAALLT MSENNPLAAD EGEVRRDCRF VNSA* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 2.0e-5 | 265 | 296 | 32 | + Peroxidase. | ||
PLN02879 | PLN02879 | 5.0e-7 | 219 | 313 | 99 | + L-ascorbate peroxidase | ||
pfam00141 | peroxidase | 1.0e-24 | 49 | 183 | 136 | + Peroxidase. | ||
PLN03030 | PLN03030 | 9.0e-33 | 32 | 332 | 314 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 4.0e-101 | 32 | 331 | 305 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC84057.1 | 0 | 33 | 334 | 27 | 330 | putative peroxidase [Oryza sativa Japonica Group] |
GenBank | EAZ05247.1 | 0 | 33 | 328 | 29 | 326 | hypothetical protein OsI_27449 [Oryza sativa Indica Group] |
GenBank | EAZ27428.1 | 0 | 33 | 323 | 27 | 319 | hypothetical protein OsJ_11374 [Oryza sativa Japonica Group] |
RefSeq | NP_001060737.1 | 0 | 42 | 334 | 3 | 295 | Os07g0694300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002439661.1 | 0 | 4 | 334 | 1 | 339 | hypothetical protein SORBIDRAFT_09g018150 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1bgp_A | 0 | 32 | 332 | 8 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 3hdl_A | 0 | 33 | 333 | 2 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1sch_B | 0 | 33 | 332 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 33 | 332 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1qo4_A | 0 | 33 | 332 | 3 | 304 | A Chain A, Peanut Peroxidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |