y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00029652m |
Family | GT75 |
Protein Properties | Length: 349 Molecular Weight: 38795.5 Isoelectric Point: 7.1366 |
Chromosome | Chromosome/Scaffold: 006753 Start: 10915 End: 11961 |
Description | Alpha-1,4-glucan-protein synthase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT75 | 5 | 344 | 0 |
IQDSEVDIVIAALQPNLTTFFEAWRPFFSRFHVIVVKDPDMTQNLQIPTGFDLKVYTKSDIDGVLGATSINFSGHSCRYFGYLVSRKKYVISIDDNCLPA KDTVGSTVDAVAQHMANLKTPATPFFFNTLYDPYRKGADFVRGYPFSLREGVECMLSCGLWLHNADYDPMTHVVKRNQRNTTYVDAVMTVPLGAMLPVSG INVAFNREALGPAIFPGLRLRNEGKHRWDTLEDVWNGLCAKVVCDSLGYGVKTGLPYVMRSDAEAGKALESLKDWEGVKIMDDVLPFFQSLKLSRTAVTV EDCVKELASIVREKLGPKNAIFTKAADAMVEWNNLWKSHA |
Full Sequence |
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Protein Sequence Length: 349 Download |
MSSVIQDSEV DIVIAALQPN LTTFFEAWRP FFSRFHVIVV KDPDMTQNLQ IPTGFDLKVY 60 TKSDIDGVLG ATSINFSGHS CRYFGYLVSR KKYVISIDDN CLPAKDTVGS TVDAVAQHMA 120 NLKTPATPFF FNTLYDPYRK GADFVRGYPF SLREGVECML SCGLWLHNAD YDPMTHVVKR 180 NQRNTTYVDA VMTVPLGAML PVSGINVAFN REALGPAIFP GLRLRNEGKH RWDTLEDVWN 240 GLCAKVVCDS LGYGVKTGLP YVMRSDAEAG KALESLKDWE GVKIMDDVLP FFQSLKLSRT 300 AVTVEDCVKE LASIVREKLG PKNAIFTKAA DAMVEWNNLW KSHAARNA* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03214 | RGP | 0 | 1 | 348 | 350 | + Reversibly glycosylated polypeptide. | ||
PLN03180 | PLN03180 | 0 | 1 | 343 | 346 | + reversibly glycosylated polypeptide; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0007047 | : GO:0044234 |
GO:0008466 | glycogenin glucosyltransferase activity |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030054 | cell junction |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86668.1 | 0 | 5 | 348 | 5 | 349 | unknown [Zea mays] |
EMBL | CAA77236.1 | 0 | 1 | 348 | 1 | 348 | amylogenin [Triticum aestivum] |
RefSeq | NP_001054143.1 | 0 | 1 | 348 | 1 | 347 | Os04g0660400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151577.1 | 0 | 5 | 348 | 5 | 349 | alpha-1,4-glucan-protein synthase [Zea mays] |
RefSeq | XP_002447267.1 | 0 | 5 | 348 | 5 | 348 | hypothetical protein SORBIDRAFT_06g031590 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL729234 | 265 | 21 | 285 | 0 |
CK208725 | 286 | 5 | 290 | 0 |
GT040275 | 289 | 61 | 349 | 0 |
JG867138 | 268 | 82 | 349 | 0 |
CK208725 | 46 | 288 | 333 | 0.000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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