y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10027526m |
Family | GT75 |
Protein Properties | Length: 373 Molecular Weight: 42561.7 Isoelectric Point: 6.2479 |
Chromosome | Chromosome/Scaffold: 8 Start: 6557735 End: 6559377 |
Description | reversibly glycosylated polypeptide 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT75 | 14 | 349 | 0 |
LKDDVDIVIPTIRSLDFLEQWRPFLQHYHLIIVQDGDPSIKIRVPDGYDYELYNRNDINKILGPRASCISYKDGGCRCFGFMVSKKKYIYTIDDDCFVAK DPSGKEINVIAQHIKNLETPSTPHYFNTLYDPFRDGTDFVRGYPFSLREGVQTAISHGLWLNIPDYDAPTQLVKPRERNARYVDAVMTIPKGVLYPMCGM NLAFNRELIGPAMYFGLMGEGQPISRYDDMWAGWAAKVVCDHLGFGVKTGLPYLWHSKASNPFVNLKKEHKGLHWQEDMVPFFQNLRLSKESDTAAKCYM EISKMTKENLTKVDPYFENLADAMVTWLEAWEELNP |
Full Sequence |
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Protein Sequence Length: 373 Download |
MTGYNLEAIE AAPLKDDVDI VIPTIRSLDF LEQWRPFLQH YHLIIVQDGD PSIKIRVPDG 60 YDYELYNRND INKILGPRAS CISYKDGGCR CFGFMVSKKK YIYTIDDDCF VAKDPSGKEI 120 NVIAQHIKNL ETPSTPHYFN TLYDPFRDGT DFVRGYPFSL REGVQTAISH GLWLNIPDYD 180 APTQLVKPRE RNARYVDAVM TIPKGVLYPM CGMNLAFNRE LIGPAMYFGL MGEGQPISRY 240 DDMWAGWAAK VVCDHLGFGV KTGLPYLWHS KASNPFVNLK KEHKGLHWQE DMVPFFQNLR 300 LSKESDTAAK CYMEISKMTK ENLTKVDPYF ENLADAMVTW LEAWEELNPP VKNEACDDKP 360 VKKDNGKDVK AK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03180 | PLN03180 | 0 | 6 | 351 | 346 | + reversibly glycosylated polypeptide; Provisional | ||
pfam03214 | RGP | 0 | 11 | 349 | 344 | + Reversibly glycosylated polypeptide. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0007047 | : GO:0044234 |
GO:0008466 | glycogenin glucosyltransferase activity |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030054 | cell junction |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_186872.1 | 0 | 14 | 352 | 18 | 356 | RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1); cellulose synthase (UDP-forming) [Arabidopsis thaliana] |
RefSeq | NP_197069.1 | 0 | 14 | 353 | 18 | 357 | RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_199888.1 | 0 | 1 | 372 | 1 | 364 | RGP4 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 4); transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002283867.1 | 0 | 8 | 364 | 5 | 363 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511153.1 | 0 | 13 | 364 | 11 | 362 | Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO638685 | 362 | 6 | 367 | 0 |
HO646415 | 356 | 12 | 367 | 0 |
HO609023 | 356 | 12 | 367 | 0 |
HO852574 | 349 | 14 | 362 | 0 |
HO810375 | 349 | 14 | 362 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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