y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00004842m |
Family | GT77 |
Protein Properties | Length: 372 Molecular Weight: 41212.1 Isoelectric Point: 8.9247 |
Chromosome | Chromosome/Scaffold: 017959 Start: 3925 End: 5489 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT77 | 127 | 323 | 0 |
LNHTLIVAVDAGGFDRCRAVHPHCYLLEVRSANVSAANRFLSKGYLELVWTKLSLQQRVLELGYNYLFTDVDVMWLRDPFRHINQYADVTMSCDRFSGEP ESLKNSPNTGFHYVKSTERTVAMVRYWRAARPRFPPHHDQKIFDNIKRELAGKLGVRIAFLDTALFGTFCEFRDGIDGGVCTMHANCCIGLDNKVRE |
Full Sequence |
---|
Protein Sequence Length: 372 Download |
MGSMSKRSGL GRHSGSFLLG ALLPTALLFF LASDRVGERL TSISSIGNGY LLNCPARQAN 60 LSAPAGDDEE EQDVDRFPGL AELLPRVATA DRTVIVTSVN EAWAAPGSLL DLFRASFRNG 120 EGIEHLLNHT LIVAVDAGGF DRCRAVHPHC YLLEVRSANV SAANRFLSKG YLELVWTKLS 180 LQQRVLELGY NYLFTDVDVM WLRDPFRHIN QYADVTMSCD RFSGEPESLK NSPNTGFHYV 240 KSTERTVAMV RYWRAARPRF PPHHDQKIFD NIKRELAGKL GVRIAFLDTA LFGTFCEFRD 300 GIDGGVCTMH ANCCIGLDNK VRELRGVVAA WKNYTALPPA EKEAGKASWP YPTRCRAARR 360 AKPARPAPIK N* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 1.0e-68 | 125 | 324 | 210 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC72055.1 | 0 | 1 | 360 | 10 | 383 | hypothetical protein OsI_04965 [Oryza sativa Indica Group] |
GenBank | EEC72056.1 | 0 | 34 | 356 | 39 | 361 | hypothetical protein OsI_04966 [Oryza sativa Indica Group] |
RefSeq | NP_001045223.1 | 0 | 34 | 356 | 39 | 361 | Os01g0921000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002456849.1 | 0 | 76 | 355 | 13 | 292 | hypothetical protein SORBIDRAFT_03g044030 [Sorghum bicolor] |
RefSeq | XP_002456850.1 | 0 | 4 | 356 | 9 | 347 | hypothetical protein SORBIDRAFT_03g044040 [Sorghum bicolor] |