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Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00001744m |
Family | GT77 |
Protein Properties | Length: 439 Molecular Weight: 48433.9 Isoelectric Point: 7.1274 |
Chromosome | Chromosome/Scaffold: 0101636 Start: 612 End: 3255 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 209 | 404 | 0 |
RHLLIVAMDGKAFQRCLAVHPFCYWFRVAGMDFAGEQKYMKGDYLEMMWRRNRLQQRVLELGYSFLFTDVDILWFRSPFPRLPAGAQVVMSSDFFVGDPA SPNNYPNGGLLYVRSSPAAVAFYEHWQASRARFPGKHEQYVFDMIVKEGVPATIGAAVRFLDTAVFGGFCQHGKDLGKVATMHANCCIGLENKLFD |
Full Sequence |
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Protein Sequence Length: 439 Download |
MIRPQAGLLL RSLGAGGGAR PGAMRSATSL LLGAALATAF FLLYTSLCRD IGGSPGTPPP 60 RWERREAGKA VETGAAAVAD REVRDLNPKQ REHVAREEER RKVEVMHGDG DGGGGHGARK 120 DEENGRDSEQ EQPQQIVMPS ATSTPTEQQQ HQQETPSEDD LADLLRRAAT SDKTVLMTAI 180 NEAWAAPGSF LDLFLESFRH GEGTGDLPRH LLIVAMDGKA FQRCLAVHPF CYWFRVAGMD 240 FAGEQKYMKG DYLEMMWRRN RLQQRVLELG YSFLFTDVDI LWFRSPFPRL PAGAQVVMSS 300 DFFVGDPASP NNYPNGGLLY VRSSPAAVAF YEHWQASRAR FPGKHEQYVF DMIVKEGVPA 360 TIGAAVRFLD TAVFGGFCQH GKDLGKVATM HANCCIGLEN KLFDLKNVLD DWKAYRARVA 420 AGDDARGFSW RVPGRCIH* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 3.0e-69 | 209 | 405 | 205 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27759.1 | 0 | 24 | 438 | 1 | 407 | unknown [Zea mays] |
GenBank | ACN32140.1 | 0 | 23 | 438 | 36 | 443 | unknown [Zea mays] |
GenBank | ACR34176.1 | 0 | 145 | 438 | 14 | 303 | unknown [Zea mays] |
RefSeq | NP_001059404.1 | 0 | 25 | 438 | 3 | 406 | Os07g0294800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150863.1 | 0 | 24 | 438 | 1 | 412 | regulatory protein [Zea mays] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL856915 | 229 | 211 | 439 | 0 |
FL835930 | 222 | 139 | 360 | 0 |
FL853264 | 215 | 225 | 439 | 0 |
HX200573 | 240 | 160 | 399 | 0 |
FL835930 | 43 | 360 | 402 | 0.0000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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