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Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g104930.1 |
Family | CE10 |
Protein Properties | Length: 805 Molecular Weight: 90185.2 Isoelectric Point: 6.2821 |
Chromosome | Chromosome/Scaffold: 1 Start: 30929602 End: 30935798 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 37 | 322 | 0 |
VPPNPDHPNSPSKDIIISQNPNISARIYLPKNPTTKLPILVFFHGGGFFFESAFSKLYHEHFNVFVPQANSIVVSVEYRLAPEHPLPACYNDCWNSLQWV ASNSAPNPVNPESWLINHGDFNRVFIGGDSAGGNIVHNIAMRAGSEALPNGVKLLGAILQQPYFYSSYPVGLESVKLKSSDKDFHYSVWNFVYPSAPGGI DNPMINPVGIGAPSLDGLGCDRIIICVAGKDGIRERGVWYYELVKKSGWKGKLELFEEEDEDHVYHIFHPESESGQKLIKHLASFL | |||
CE10 | 359 | 644 | 0 |
QPPTVPPNPNHPNSPSKDIIISQNPNISARIYLPKNPTTKLPILVFFHGGGFFFESAFSKVHHEHFNIFIPLANSIVVSVEYRLAPEHPLPACYNDCWNS LQWVASNSAKNPVNPEPWLINHGDFNRVFIGGASAGGNIVHNIAMRAGSEALPNDVKLLGAILQHPLFYSSYPVGLENVKLKDFYSYLWNFVYPSAPGGI DNPMVNPVGIGAPSLDGLGCDRMIVCVAGKDKLRERGVWYYELIKKSGWKGKLELFEEEDEDHVYHIFHPESESGQKLIKHLASFL |
Full Sequence |
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Protein Sequence Length: 805 Download |
MASITTDATK HIISEIPTYI TVYSDGTVDR PRQAPTVPPN PDHPNSPSKD IIISQNPNIS 60 ARIYLPKNPT TKLPILVFFH GGGFFFESAF SKLYHEHFNV FVPQANSIVV SVEYRLAPEH 120 PLPACYNDCW NSLQWVASNS APNPVNPESW LINHGDFNRV FIGGDSAGGN IVHNIAMRAG 180 SEALPNGVKL LGAILQQPYF YSSYPVGLES VKLKSSDKDF HYSVWNFVYP SAPGGIDNPM 240 INPVGIGAPS LDGLGCDRII ICVAGKDGIR ERGVWYYELV KKSGWKGKLE LFEEEDEDHV 300 YHIFHPESES GQKLIKHLAS FLHDISESMA TTDVPKHIIS EIPTYITVYS DGTVDRPRQP 360 PTVPPNPNHP NSPSKDIIIS QNPNISARIY LPKNPTTKLP ILVFFHGGGF FFESAFSKVH 420 HEHFNIFIPL ANSIVVSVEY RLAPEHPLPA CYNDCWNSLQ WVASNSAKNP VNPEPWLINH 480 GDFNRVFIGG ASAGGNIVHN IAMRAGSEAL PNDVKLLGAI LQHPLFYSSY PVGLENVKLK 540 DFYSYLWNFV YPSAPGGIDN PMVNPVGIGA PSLDGLGCDR MIVCVAGKDK LRERGVWYYE 600 LIKKSGWKGK LELFEEEDED HVYHIFHPES ESGQKLIKHL ASFLHEYSLS NSSNFRPFLL 660 PPLCSSSQDV EGDSALRRIR LNRVIYLTFP LKMRRHRVDA KIGEAVSFVM EVKHVFQNRR 720 EKYDEFLKIL DDFSAERIDR AAVKEGMTEL LKDHKGLISR FNIFLPPGQE ISLPLDDDEQ 780 RGDGLAFEDE QKHEISLPFD DQQQ* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02671 | PAH | 1.0e-14 | 720 | 766 | 47 | + Paired amphipathic helix repeat. This family contains the paired amphipathic helix repeat. The family contains the yeast SIN3 gene (also known as SDI1) that is a negative regulator of the yeast HO gene. This repeat may be distantly related to the helix-loop-helix motif, which mediate protein-protein interactions. | ||
COG0657 | Aes | 4.0e-27 | 382 | 644 | 268 | + Esterase/lipase [Lipid metabolism] | ||
COG0657 | Aes | 1.0e-28 | 34 | 325 | 299 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 4.0e-44 | 76 | 303 | 236 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
pfam07859 | Abhydrolase_3 | 1.0e-45 | 402 | 625 | 230 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0005634 | nucleus |
GO:0006355 | regulation of transcription, DNA-dependent |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD33408.1 | 0 | 1 | 324 | 1 | 327 | Esterase/lipase/thioesterase [Medicago truncatula] |
GenBank | ABD33408.1 | 0 | 331 | 646 | 5 | 327 | Esterase/lipase/thioesterase [Medicago truncatula] |
GenBank | ACU19949.1 | 0 | 10 | 324 | 7 | 323 | unknown [Glycine max] |
GenBank | ACU19949.1 | 0 | 335 | 646 | 6 | 323 | unknown [Glycine max] |
RefSeq | XP_002462487.1 | 0 | 19 | 646 | 14 | 633 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 8e-34 | 5 | 284 | 11 | 293 | A Chain A, E. Coli Gsp Amidase Cys59 Sulfenic Acid |
PDB | 2o7v_A | 1e-32 | 323 | 606 | 3 | 293 | A Chain A, E. Coli Gsp Amidase Cys59 Sulfenic Acid |
PDB | 2o7r_A | 8e-34 | 5 | 284 | 11 | 293 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2o7r_A | 1e-32 | 323 | 606 | 3 | 293 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsi_A | 2e-30 | 48 | 294 | 72 | 323 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BF004052 | 286 | 9 | 294 | 0 |
BF004052 | 285 | 336 | 616 | 0 |
EV259389 | 256 | 1 | 256 | 0 |
EV259389 | 259 | 326 | 578 | 0 |
DW017574 | 248 | 1 | 248 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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