y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00055834m |
Family | CE10 |
Protein Properties | Length: 276 Molecular Weight: 28856.6 Isoelectric Point: 8.8199 |
Chromosome | Chromosome/Scaffold: 078628 Start: 763 End: 1621 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 55 | 267 | 6.3e-39 |
LAPRASTLPLLVYFHGGAFSVHSAFSGAHFQFLNALVSAARAVAVSVDFRLAPEHPLPAAYDDAWAVSSCAGSGAGAGGSAPEEEPWLAAHGDPARLFVA GDSTGGNIAHNVAMRAGGGGARIEGMVLLHPYFRGGELLPSERAEPRSLERAERWWALVCAGRYGIDHPFVNPLAMPAAGWASLGCRRALVAVAGRDKMR DRGRRYVEALRAS |
Full Sequence |
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Protein Sequence Length: 276 Download |
MDPDTEVDVD LSPYLIRYKS GRVRRLTGTS RVAAGAVAAT GVTSRDVVTD AATGLAPRAS 60 TLPLLVYFHG GAFSVHSAFS GAHFQFLNAL VSAARAVAVS VDFRLAPEHP LPAAYDDAWA 120 VSSCAGSGAG AGGSAPEEEP WLAAHGDPAR LFVAGDSTGG NIAHNVAMRA GGGGARIEGM 180 VLLHPYFRGG ELLPSERAEP RSLERAERWW ALVCAGRYGI DHPFVNPLAM PAAGWASLGC 240 RRALVAVAGR DKMRDRGRRY VEALRASAWA GGKAAP 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0657 | Aes | 8.0e-16 | 57 | 267 | 222 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-36 | 65 | 266 | 212 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD09344.1 | 0 | 1 | 275 | 1 | 286 | putative PrMC3 [Oryza sativa Japonica Group] |
GenBank | EAZ07334.1 | 0 | 1 | 275 | 1 | 286 | hypothetical protein OsI_29583 [Oryza sativa Indica Group] |
GenBank | EEE68857.1 | 0 | 1 | 275 | 1 | 263 | hypothetical protein OsJ_27657 [Oryza sativa Japonica Group] |
RefSeq | NP_001062032.1 | 0 | 1 | 275 | 51 | 336 | Os08g0475000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152298.1 | 0 | 2 | 271 | 39 | 316 | gibberellin receptor GID1L2 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 9e-33 | 31 | 267 | 59 | 312 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 2zsh_A | 9e-33 | 31 | 267 | 59 | 312 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 3e-31 | 8 | 265 | 25 | 309 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 3e-31 | 8 | 265 | 25 | 309 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 3e-31 | 8 | 265 | 25 | 309 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK207017 | 280 | 4 | 271 | 0 |
CT859372 | 137 | 102 | 234 | 0 |
CT859372 | 98 | 1 | 88 | 0 |
CT859372 | 47 | 230 | 276 | 0 |
EE032242 | 259 | 17 | 263 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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