Statistics on FUNGIDB
General Statistics
You are browserling the dbCAN-seq database: FUNGIDB.
Currently the database contains:
| Total number of genes | 2839235 | Total number of CAZymes | 84838 |
| Total number of CGCs | 1070 |
| Number of annotated CGCs (with substrate) | 1070 |
| Number of CGCs annotated by dbCAN-PUL search (with substrate) | 435 |
| Number of CGCs annotated by eCAMI sub-family (with substrate) | 635 |
| Number of substrates | 29 |
| Number of phyla | 7 |
| Number of genomes | 255 |
| Number of homologous PULs in dbCAN-PUL | 109 |
| Number of genes in CGCs | 146223 | ||
| Number of CAZymes in CGCs | 39436 | Number of CAZymes in annotated CGGs (with substrate) | 2720 |
| by dbCAN-PUL search | by eCAMI sub-family | |
|---|---|---|
| Number of CAZymes in CGCs | 1033 | 1293 |
| Number of TC in CGCs | 754 | 1621 |
| Number of TF in CGCs | 94 | 88 |
| Number of STP in CGCs | 39 | 75 |
| Number of null in CGCs | 870 | 1619 |
| # of MAGs containing CAZyme | 255 |
| # of MAGs containing CGC | 254 |
| # of MAGs containing CGC annotated by dbCAN-PUL search | 139 |
| # of MAGs containing CGC annotated by eCAMI sub-family | 158 |
Distribution of CGCs according to substrate predicted by dbCAN-PUL search
Distribution of CGCs by substrate predicted by eCAMI sub-family
Counts of CGCs with the plotted PUL as the best hit from dbCAN-PUL
Counts of CGC-encoding MAGs in each phylum