CAZyme Information: MGYG000004899_00734

Basic Information

• Species: Bacteroides sp900555635
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900555635
• CAZyme ID: MGYG000004899_00734
• CAZy Family: GH3
• CAZyme Description: Xylan 1,4-beta-xylosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
856		95938.23	7.3734

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004899	5396709	MAG	China	Asia

• Gene Location: Start: 92442; End: 95012 Strand: +

Full Sequence      

MKTFKKIVLSGVLALVTCAHPAQAQELYKNEKATTHERVMDLLSRLTVEEKISLLRATSP
GISRLDIPKYYHGNEALHGVVRPGRFTVFPQAIGFAATWNPTLLQRIATVISDEARARWN
ELDQGREQKSQFSDLLTFWSPTVNMARDPRWGRTPETYGEDPYLSGVMGTAFVKGLQGDD
ARYLKIVSTPKHFAANNEEHNRFVCNPQISEKQLREYYLPAFEACVKDGKAASIMSAYNA
INDVPCTLNPWLLTKVLRQDWGFDGYVVSDCGGPSLLVNAHKYVKTKEAAATLSIKAGLD
LECGDDVYDLPLLNAYRQSMVTDADIDSAAYRVLTARMKLGLFDSGEQNPYTRISPSVIG
SKEHQQVSLDAARQCIVLLKNQKNMLPLNEKKIKSIAVVGINAGSCEFGDYSGSPVMAPV
SIVEGIKARVGKDVKVVYAPWKSAADGMELIQGANFPEGLQAEYYENTRLQGTPKVRKES
WINFEPANQAPDPFLPKSPLSIRWTGKLRPTVSGEYTFNFTSDDGCRLSIDDKLVIDSWN
GHAVRIDSVSMYMEAGKDYQLKAEYYDNRDYAIAKLQWRVPQVEKKTRLDLYGEAGKAVR
ECETVVAVLGINKSIEREGQDRYDIQLPADQREFLQEIYKVNPNIVVVLVAGSSLAVNWM
NEHIPAIVNAWYPGEQGGTAVAEVLFGDYNPGGRLPLTYYKSLDELPAFDDYDITKGRTY
KYFKGDVLYPFGYGLSYTSFKYSDLQVSDGEKEITLSFRLKNTGKRAGDEVAQAYVKLPG
RDEVMPIKELKGFERITLKSGENRKVQIKLRKDLLRYWDEGQAKFVYPSGNYTIMVGASS
ADIRLQKEVAINQKIE

Enzyme Prediction     

No EC number prediction in MGYG000004899_00734.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	62	303	1.5e-71	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	4.06e-137	5	844	2	758	beta-glucosidase BglX.
PLN03080	PLN03080	5.55e-120	18	837	32	769	Probable beta-xylosidase; Provisional
COG1472	BglX	1.40e-77	43	412	35	372	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	2.70e-55	42	336	42	316	Glycosyl hydrolase family 3 N terminal domain.
pfam01915	Glyco_hydro_3_C	6.94e-53	376	737	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALJ59400.1	0.0	1	854	1	854
QUT89559.1	0.0	1	854	1	854
QDO67855.1	0.0	1	854	1	854
QRQ47317.1	0.0	1	854	1	855
QUT46491.1	0.0	1	854	1	855

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5Z87_A	1.01e-95	63	844	119	778	ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
3AC0_A	4.93e-95	39	855	6	840	Crystalstructure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_B Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_C Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_D Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus]
3ABZ_A	3.43e-91	39	855	6	840	Crystalstructure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_B Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_C Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_D Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus]
6R5I_A	6.39e-89	63	841	68	723	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	3.30e-88	63	841	68	723	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
D5EY15	8.35e-158	13	847	7	856	Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
T2KMH0	1.51e-111	5	840	2	710	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q94KD8	9.17e-111	37	846	53	759	Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9SGZ5	1.19e-102	37	839	47	759	Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
P27034	2.01e-101	41	844	4	803	Beta-glucosidase OS=Rhizobium radiobacter OX=358 GN=cbg-1 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000889	0.585585	0.412396	0.000420	0.000382	0.000306

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004899_00734.