dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004884_01032

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Species

Lineage

Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; KLE1615;

CAZyme ID

MGYG000004884_01032

CAZy Family

GH28

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
425	MGYG000004884_91\|CGC1	46146.51	5.0128

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004884	2896455	MAG	China	Asia

Gene Location

Start: 1698; End: 2975 Strand: +

No EC number prediction in MGYG000004884_01032.

Family	Start	End	Evalue	family coverage
GH28	51	408	2.2e-85	0.9353846153846154

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5434	Pgu1	5.02e-85	47	398	100	470	Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295	Glyco_hydro_28	2.29e-25	111	404	37	303	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003	PLN03003	2.30e-21	121	354	107	303	Probable polygalacturonase At3g15720
PLN02218	PLN02218	3.37e-17	49	405	88	409	polygalacturonase ADPG
PLN02793	PLN02793	2.58e-15	109	352	128	340	Probable polygalacturonase

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QSO49240.1	1.46e-152	50	425	43	417
ASA21605.1	2.96e-146	22	422	7	418
AEN95221.1	1.84e-134	39	407	4	372
ACB77558.1	1.57e-130	19	425	32	446
AWI08759.1	2.46e-128	19	423	83	501

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3JUR_A	2.74e-94	48	425	46	431	Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A	1.26e-83	44	411	59	432	Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A	5.77e-19	48	423	175	585	Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A	3.60e-16	48	410	28	367	ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
6KVE_A	9.75e-15	109	378	55	299	ChainA, Endo-polygalacturonase [Evansstolkia leycettana]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A7PZL3	7.75e-44	44	404	80	424	Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644	1.10e-30	185	339	25	184	Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q9LW07	1.92e-22	109	355	99	304	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
Q9FY19	1.69e-20	108	385	133	381	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1
Q949Z1	2.09e-19	43	378	93	399	Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000012	0.000029	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000004884_01032.