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CAZyme Information: MGYG000004880_02248
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; | |||||||||||
| CAZyme ID | MGYG000004880_02248 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 339; End: 3785 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 68 | 246 | 2.4e-50 | 0.9890710382513661 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd00063 | FN3 | 1.88e-08 | 426 | 510 | 4 | 93 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| smart00656 | Amb_all | 6.37e-08 | 66 | 251 | 1 | 190 | Amb_all domain. |
| PRK15319 | PRK15319 | 8.45e-08 | 518 | 1015 | 550 | 1052 | fibronectin-binding autotransporter adhesin ShdA. |
| COG3866 | PelB | 2.20e-07 | 1 | 263 | 16 | 289 | Pectate lyase [Carbohydrate transport and metabolism]. |
| PRK15319 | PRK15319 | 2.51e-06 | 575 | 1052 | 814 | 1365 | fibronectin-binding autotransporter adhesin ShdA. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AEV97716.1 | 1.21e-289 | 14 | 1069 | 28 | 1087 |
| QCD38445.1 | 2.99e-143 | 10 | 503 | 15 | 554 |
| QCP72135.1 | 5.45e-138 | 10 | 503 | 15 | 554 |
| QUT73817.1 | 2.39e-137 | 15 | 545 | 21 | 596 |
| QKD53272.1 | 3.94e-130 | 5 | 414 | 7 | 412 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1DPF0 | 5.02e-117 | 18 | 414 | 22 | 414 | Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1 |
| Q4WL88 | 1.01e-115 | 18 | 414 | 22 | 414 | Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1 |
| B0XMA2 | 1.42e-115 | 18 | 414 | 22 | 414 | Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1 |
| Q0CLG7 | 2.93e-112 | 18 | 414 | 21 | 413 | Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1 |
| B8NQQ7 | 1.11e-111 | 4 | 414 | 6 | 413 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.097465 | 0.884403 | 0.017042 | 0.000465 | 0.000290 | 0.000297 |