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CAZyme Information: MGYG000004879_00286

You are here: Home > Sequence: MGYG000004879_00286

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_N;
CAZyme ID MGYG000004879_00286
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1200 MGYG000004879_4|CGC1 132003.19 4.1866
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004879 3926800 MAG China Asia
Gene Location Start: 1959;  End: 5561  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004879_00286.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 36 916 2.1e-58 0.7845744680851063

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 1.43e-15 347 553 176 405
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 2.89e-12 143 570 112 471
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK10150 PRK10150 5.12e-12 144 564 69 427
beta-D-glucuronidase; Provisional
PRK09525 lacZ 2.55e-10 144 553 124 461
beta-galactosidase.
pfam00703 Glyco_hydro_2 1.02e-09 299 431 13 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASA20342.1 2.15e-240 48 1195 9 1086
QGH35456.1 5.33e-238 35 1195 2 1095
AGT88372.1 2.31e-148 110 1003 29 793
ADJ49535.1 2.31e-148 110 1003 29 793
QMV17606.1 3.17e-139 31 987 31 843

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6HPD_A 4.49e-111 49 1041 37 837
Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901]
7CWD_A 2.05e-22 110 924 33 746
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
4YPJ_A 9.47e-21 110 924 39 752
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
5T98_A 3.79e-20 106 918 50 758
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
6ED1_A 1.26e-17 110 752 53 609
ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_C Chain C, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_D Chain D, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KN75 2.05e-110 49 1041 28 828
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
T2KM09 1.97e-17 99 763 64 642
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
A7LXS9 8.82e-17 94 930 56 798
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
O52847 3.94e-16 144 557 137 484
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
T2KPJ7 1.08e-11 103 598 71 477
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000265 0.999022 0.000186 0.000179 0.000158 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004879_00286.