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CAZyme Information: MGYG000004859_00878
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp008014645 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp008014645 | |||||||||||
| CAZyme ID | MGYG000004859_00878 | |||||||||||
| CAZy Family | CBM32 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 5677; End: 11112 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM32 | 119 | 247 | 3.7e-21 | 0.9193548387096774 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00754 | F5_F8_type_C | 2.39e-19 | 119 | 233 | 4 | 118 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| pfam09479 | Flg_new | 5.28e-11 | 1671 | 1732 | 1 | 64 | Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria. |
| pfam00754 | F5_F8_type_C | 4.86e-08 | 267 | 409 | 1 | 122 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| cd00057 | FA58C | 6.58e-08 | 108 | 233 | 8 | 134 | Substituted updates: Jan 31, 2002 |
| pfam02065 | Melibiase | 1.01e-07 | 587 | 790 | 1 | 190 | Melibiase. Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36A-B and GH36D-K and from GH27. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCC62414.1 | 0.0 | 266 | 1811 | 30 | 1656 |
| AOY54034.1 | 2.53e-170 | 24 | 1734 | 29 | 1521 |
| ABG83191.1 | 3.30e-169 | 24 | 1734 | 29 | 1521 |
| QQA11075.1 | 3.30e-169 | 34 | 1734 | 39 | 1521 |
| BAB80970.1 | 4.55e-169 | 34 | 1734 | 39 | 1521 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000444 | 0.998561 | 0.000222 | 0.000266 | 0.000247 | 0.000216 |
