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CAZyme Information: MGYG000004854_00138
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; | |||||||||||
| CAZyme ID | MGYG000004854_00138 | |||||||||||
| CAZy Family | CBM4 | |||||||||||
| CAZyme Description | Cellulose 1,4-beta-cellobiosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 156904; End: 159894 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH9 | 355 | 906 | 2.9e-97 | 0.9880382775119617 |
| CBM4 | 37 | 180 | 1.4e-20 | 0.9603174603174603 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00759 | Glyco_hydro_9 | 3.51e-50 | 355 | 906 | 1 | 374 | Glycosyl hydrolase family 9. |
| cd02850 | E_set_Cellulase_N | 9.02e-26 | 246 | 344 | 2 | 86 | N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
| pfam02927 | CelD_N | 5.12e-22 | 246 | 334 | 3 | 80 | Cellulase N-terminal ig-like domain. |
| pfam02018 | CBM_4_9 | 7.52e-07 | 41 | 180 | 8 | 129 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
| PLN00119 | PLN00119 | 0.002 | 805 | 833 | 385 | 413 | endoglucanase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL17684.1 | 1.31e-248 | 1 | 964 | 2 | 932 |
| CAS03458.1 | 1.51e-216 | 1 | 915 | 1 | 908 |
| AAR01216.1 | 2.33e-214 | 10 | 916 | 5 | 905 |
| BAH56283.1 | 3.78e-209 | 21 | 920 | 160 | 1015 |
| ADU22927.1 | 5.97e-207 | 7 | 920 | 6 | 905 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1RQ5_A | 1.47e-119 | 246 | 915 | 7 | 610 | ChainA, Cellobiohydrolase [Acetivibrio thermocellus] |
| 1UT9_A | 2.00e-119 | 246 | 909 | 7 | 604 | ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus] |
| 3X17_A | 5.81e-50 | 246 | 907 | 18 | 554 | Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium] |
| 6DHT_A | 6.91e-50 | 246 | 907 | 18 | 562 | Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483] |
| 5U0H_A | 3.48e-42 | 285 | 928 | 20 | 554 | Crystalstructure of GH family 9 endoglucanase J30 [Thermobacillus composti KWC4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C2S1 | 1.03e-133 | 32 | 944 | 38 | 848 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1 |
| A3DCH1 | 3.94e-133 | 32 | 944 | 38 | 848 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1 |
| Q05156 | 8.10e-111 | 41 | 912 | 39 | 745 | Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1 |
| P10476 | 4.60e-98 | 238 | 914 | 33 | 603 | Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2 |
| P14090 | 5.94e-96 | 229 | 914 | 324 | 912 | Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000632 | 0.998531 | 0.000205 | 0.000242 | 0.000183 | 0.000172 |
