CAZyme Information: MGYG000004797_02320

Basic Information

• Species: Phocaeicola sartorii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sartorii
• CAZyme ID: MGYG000004797_02320
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1103	MGYG000004797_30|CGC1	123881.81	7.7989

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004797	5247182	MAG	China	Asia

• Gene Location: Start: 49807; End: 53118 Strand: -

Full Sequence      

MQKILLLIASLFYFNFILAENEIKSWQGIHETPLSSLEQQFAEPPVEFANHVIWGWEGKM
DKKTICNDLDSIKKKGFRAVIFEAGYKLPFKYLSEEWFKAIRTGVLEAKKRGMKVWIIDE
GKYPSGFAGGKFSQERPDLRMQALVIDDTIQIKRGEVMTNHKIAPEIISAVAVSTSGAPN
RTVEIDNGKISFNAGVDDWKILLVKSDFRTAVTRAVNNPNGGKDATNSLCDYLNPVAVQQ
FIDWTHEQYKKYLGKELGTTVLGFRGDEPDYAHLPWTPSIIQTFKEIKGYDPTPYLASFF
TALPTTQEQRVKADYWDVWSGLFATHFFKLQADWCAANGVAHITHLNKEHEMPACVKAEG
DYFRNLSKVQIPGVDAIWNQIWPGTLNDFPKLASSVAHVYGKPRAFSESFAAYHISPTIP
QAKFVVDHQIARGINFFEFMFWLAGSKQRNWMSDPGMKGLNEYTNRTTYLMSQGKPGARI
AMYYPTSTMWLGNNEVYKDIVTLTQQLLTHQRDFDYINDDAFTEALTIGPGYLENKSGQR
YETLIIPSSDVISASAWKVIETFSSRGGKVLFWGKKPASFIDKSFTAPGSLSDLTNSRIE
PSTRWTARVSSSLPEPEMKIISPANDSIRYTRRVMPDGDLYFIFNEGNKATEFTADFDKV
GVAKEWNATNGTLQPINATIVNNCTRLTIKLEAWESKLISIGKSNREYNIKEYGVKGNGY
SETATLQRIINEAAHNGGGTIVIPAGEYLSGALFFPRGVDLRIEKNAKLISTVAPNEFPV
IPTRFEGIERKWRCAFLNFDHSDGVKVYGEGVIDGKGVEWKKIPFGNSGRPRLLCFTDCP
GGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIE
AHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGVAMGSEISGGIRNVTIRSCLM
DNENWSPLRFKSQPSRGGIVENITFEDITIRGARSIFDINMEWRMVPPLSPAHYPLTRLR
NIHFKNINGEAQSAGTMYGFKETPFGNDTFFFENCHIKAQKGLSISNVANVNFKGLELEI
KEGEKIYERPVNKARQPNKNTSK

Enzyme Prediction     

No EC number prediction in MGYG000004797_02320.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	37	706	3.7e-83	0.7900485436893204
GH28	734	1068	4.3e-72	0.9476923076923077

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5434	Pgu1	2.22e-58	706	1000	81	405	Polygalacturonase [Carbohydrate transport and metabolism].
pfam17132	Glyco_hydro_106	2.18e-37	188	680	364	873	alpha-L-rhamnosidase.
pfam00295	Glyco_hydro_28	2.15e-28	740	1036	8	282	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793	PLN02793	4.79e-19	703	988	48	325	Probable polygalacturonase
PLN02188	PLN02188	1.71e-18	702	1062	31	379	polygalacturonase/glycoside hydrolase family protein

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQY43070.1	0.0	1	1093	1	1093
ABR37905.1	0.0	1	1093	1	1093
QQY39769.1	0.0	1	1093	1	1093
QUT56825.1	0.0	1	1093	1	1093
QJR77999.1	0.0	1	1093	1	1093

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3JUR_A	2.10e-42	705	1087	25	440	Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A	4.15e-42	705	1082	42	452	Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
6Q2F_A	2.02e-14	224	704	458	969	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
2UVE_A	2.19e-11	709	1033	158	538	Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4C2L_A	1.93e-10	738	999	45	300	Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A7PZL3	6.08e-27	691	1045	48	414	Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
O22818	8.50e-22	709	1033	34	346	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1
P49063	7.66e-20	703	1071	65	423	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2
Q6H9K0	2.23e-18	701	1029	3	318	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1
P27644	9.77e-18	832	1044	23	249	Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000243	0.999168	0.000154	0.000145	0.000134	0.000130

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004797_02320.