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CAZyme Information: MGYG000004763_01157

You are here: Home > Sequence: MGYG000004763_01157

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-462 sp900291465
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-462; CAG-462 sp900291465
CAZyme ID MGYG000004763_01157
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
457 MGYG000004763_10|CGC1 50417.31 7.3414
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004763 3504022 MAG Denmark Europe
Gene Location Start: 39458;  End: 40831  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004763_01157.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 77 436 3.6e-78 0.9353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.18e-74 35 453 67 483
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 6.80e-21 51 455 24 386
Probable polygalacturonase At3g15720
PLN02218 PLN02218 9.37e-17 26 437 41 421
polygalacturonase ADPG
pfam00295 Glyco_hydro_28 7.19e-16 83 429 7 279
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02188 PLN02188 7.39e-16 50 342 36 287
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AND21958.1 1.05e-259 24 457 2 435
AII62903.1 2.38e-259 24 457 24 457
QUT83816.1 2.38e-259 24 457 24 457
QJR67967.1 2.38e-259 24 457 24 457
QJR55696.1 2.38e-259 24 457 24 457

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 4.46e-87 47 428 41 429
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 1.11e-86 35 431 12 417
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
1BHE_A 3.10e-17 59 424 19 361
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 1.02e-40 40 424 52 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q9LW07 1.10e-22 51 455 24 386
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
Q8RY29 2.91e-19 50 445 67 431
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
P27644 3.54e-17 211 406 29 243
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P26509 2.06e-16 59 424 45 387
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000552 0.998763 0.000176 0.000174 0.000150 0.000149

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004763_01157.