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CAZyme Information: MGYG000004697_00507
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_F; | |||||||||||
| CAZyme ID | MGYG000004697_00507 | |||||||||||
| CAZy Family | GH0 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 61098; End: 62417 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam01471 | PG_binding_1 | 1.02e-13 | 362 | 423 | 1 | 57 | Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. |
| COG3409 | PGRP | 5.21e-10 | 341 | 423 | 23 | 102 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]. |
| COG3409 | PGRP | 3.76e-09 | 352 | 423 | 116 | 183 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]. |
| pfam13620 | CarboxypepD_reg | 3.51e-06 | 37 | 130 | 6 | 81 | Carboxypeptidase regulatory-like domain. |
| COG2989 | YcbB | 0.005 | 353 | 419 | 228 | 292 | Murein L,D-transpeptidase YcbB/YkuD [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASM69598.1 | 8.15e-193 | 30 | 435 | 16 | 419 |
| AWY98201.1 | 9.44e-192 | 18 | 435 | 4 | 419 |
| QEI32542.1 | 1.23e-189 | 30 | 435 | 23 | 428 |
| QHB25032.1 | 1.23e-189 | 30 | 435 | 23 | 428 |
| QRV22093.1 | 3.02e-189 | 31 | 435 | 11 | 414 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3BKH_A | 8.24e-06 | 357 | 427 | 12 | 77 | ChainA, lytic transglycosylase [Pseudomonas phage phiKZ],3BKV_A Chain A, lytic transglycosylase [Pseudomonas phage phiKZ] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999971 | 0.000071 | 0.000003 | 0.000000 | 0.000000 | 0.000001 |