logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004690_01234

You are here: Home > Sequence: MGYG000004690_01234

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_R sp014465955
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Eubacterium_R; Eubacterium_R sp014465955
CAZyme ID MGYG000004690_01234
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
382 42984.93 4.5567
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004690 1726698 MAG Spain Europe
Gene Location Start: 70;  End: 1218  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004690_01234.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 3 370 7.5e-66 0.7789256198347108

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 2.31e-26 4 244 110 366
O-Glycosyl hydrolase family 30.
COG5520 XynC 5.04e-12 16 321 117 397
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189 Glyco_hydro_30C 4.01e-05 304 338 18 53
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADQ06412.1 1.84e-60 4 372 142 485
AUS96427.1 1.08e-48 4 373 139 481
BBC60194.1 1.33e-47 3 370 149 489
BAL61330.1 1.33e-47 3 370 149 489
QGH35960.1 2.15e-47 3 370 98 442

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 1.07e-10 4 227 114 361
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000073 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004690_01234.