logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004680_02632

You are here: Home > Sequence: MGYG000004680_02632

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora;
CAZyme ID MGYG000004680_02632
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1667 MGYG000004680_43|CGC2 179876.68 5.455
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004680 3596809 MAG Germany Europe
Gene Location Start: 22712;  End: 27715  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004680_02632.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1350 1638 9.3e-93 0.9722222222222222
PL1 128 321 8.8e-66 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 5.99e-53 1355 1638 93 402
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02773 PLN02773 1.35e-49 1356 1643 17 301
pectinesterase
pfam01095 Pectinesterase 2.61e-47 1350 1636 6 293
Pectinesterase.
PLN02682 PLN02682 5.78e-44 1350 1633 76 356
pectinesterase family protein
PLN02432 PLN02432 8.49e-43 1350 1636 17 284
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QYR21100.1 3.57e-295 72 833 46 832
AIQ73887.1 6.04e-289 10 839 2 839
AWV33235.1 2.31e-287 7 839 5 845
BCS80168.1 6.57e-236 18 1638 1 1241
ADQ45070.1 4.22e-231 72 1653 31 1246

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3UW0_A 4.20e-43 1319 1638 16 358
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NSP_A 5.90e-41 1340 1637 2 333
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
1QJV_A 3.38e-36 1340 1637 2 333
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]
2NTB_A 3.38e-36 1340 1637 2 333
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
5C1E_A 1.19e-27 1344 1614 14 265
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 9.12e-41 72 502 20 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
A1DPF0 1.70e-40 72 502 21 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 3.11e-40 72 502 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 4.21e-40 72 502 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q5B297 6.48e-39 72 502 20 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.037775 0.960026 0.000628 0.001099 0.000242 0.000200

TMHMM  Annotations      download full data without filtering help

start end
21 43