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CAZyme Information: MGYG000004680_00483

You are here: Home > Sequence: MGYG000004680_00483

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lacrimispora;
CAZyme ID MGYG000004680_00483
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
440 48938 4.2952
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004680 3596809 MAG Germany Europe
Gene Location Start: 107744;  End: 109066  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004680_00483.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 6.17e-15 365 426 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 1.45e-08 359 426 38 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 9.63e-08 355 428 116 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRV22093.1 5.33e-265 26 440 2 416
ASN94441.1 9.14e-229 30 438 6 414
QRP40879.1 9.14e-229 30 438 6 414
QJU21247.1 2.62e-228 30 438 6 414
QIX92999.1 7.48e-228 30 438 6 414

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004680_00483.