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CAZyme Information: MGYG000004634_01180

You are here: Home > Sequence: MGYG000004634_01180

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; UMGS1441;
CAZyme ID MGYG000004634_01180
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1313 143412.2 4.5131
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004634 2025534 MAG Germany Europe
Gene Location Start: 843;  End: 4784  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004634_01180.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 946 1277 8.8e-107 0.872

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07523 Big_3 1.18e-05 498 565 1 67
Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
pfam07523 Big_3 1.42e-05 246 307 4 67
Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
pfam13229 Beta_helix 1.43e-04 1029 1214 1 142
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam14592 Chondroitinas_B 2.66e-04 966 1069 3 107
Chondroitinase B. This family includes chondroitinases. These enzymes cleave the glycosaminoglycan dermatan sulfate.
pfam07523 Big_3 4.08e-04 413 486 1 67
Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANX00231.1 2.52e-211 13 1313 19 1228
AGI38277.1 3.54e-211 13 1313 19 1228
AGC67199.1 3.54e-211 13 1313 19 1228
ANW97669.1 3.54e-211 13 1313 19 1228
BAC87940.1 1.37e-210 13 1313 19 1228

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 4.77e-36 951 1288 18 343
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 1.77e-11 1095 1278 168 375
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 3.37e-63 572 1254 33 659
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6 5.19e-36 951 1288 43 368
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 4.23e-35 951 1288 43 368
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000214 0.999154 0.000160 0.000176 0.000152 0.000141

TMHMM  Annotations      download full data without filtering help

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