You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004587_02101
You are here: Home > Sequence: MGYG000004587_02101
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA1409 sp900553675 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA1409; UBA1409 sp900553675 | |||||||||||
| CAZyme ID | MGYG000004587_02101 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 4433; End: 5548 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH5 | 46 | 336 | 1.6e-44 | 0.9901639344262295 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd21510 | agarase_cat | 0.004 | 165 | 273 | 82 | 189 | alpha-beta barrel catalytic domain of agarase, such as GH86-like endo-acting agarases identified in non-marine organisms. Typically, agarases (E.C. 3.2.1.81) are found in ocean-dwelling bacteria since agarose is a principle component of red algae cell wall polysaccharides. Agarose is a linear polymer of alternating D-galactose and 3,6-anhydro-L-galactopyranose. Endo-acting agarases, such as glycoside hydrolase 16 (GH16) and GH86 hydrolyze internal beta-1,4 linkages. GH86-like endo-acting agarase of this protein family has been identified in the human intestinal bacterium Bacteroides uniformis. This acquired metabolic pathway, as demonstrated by the prevalence of agar-specific genetic cluster called polysaccharide utilization loci (PULs), varies considerably between human populations, being much more prevalent in a Japanese sample than in North America, European, or Chinese samples. Agarase activity was also identified in the non-marine bacterium Cellvibrio sp. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL16471.1 | 3.00e-107 | 12 | 365 | 6 | 361 |
| ADD61974.1 | 3.38e-104 | 31 | 366 | 68 | 406 |
| CCO03823.1 | 2.05e-103 | 25 | 366 | 53 | 397 |
| AGS51602.1 | 5.29e-103 | 33 | 365 | 45 | 388 |
| ADU21807.1 | 9.40e-93 | 31 | 366 | 72 | 408 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2C0H_A | 2.75e-20 | 31 | 336 | 2 | 327 | ChainA, MANNAN ENDO-1,4-BETA-MANNOSIDASE [Mytilus edulis] |
| 3VUP_A | 6.80e-20 | 33 | 352 | 1 | 342 | Beta-1,4-mannanasefrom the common sea hare Aplysia kurodai [Aplysia kurodai],3VUP_B Beta-1,4-mannanase from the common sea hare Aplysia kurodai [Aplysia kurodai] |
| 5Y6T_A | 1.10e-15 | 36 | 340 | 10 | 334 | ChainA, endo-1,4-beta-mannanase [Eisenia fetida] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8WPJ2 | 9.42e-20 | 26 | 336 | 11 | 341 | Mannan endo-1,4-beta-mannosidase OS=Mytilus edulis OX=6550 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000364 | 0.175134 | 0.824106 | 0.000179 | 0.000120 | 0.000095 |