logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004550_01297

You are here: Home > Sequence: MGYG000004550_01297

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000004550_01297
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000004550_39|CGC1 79226.25 5.1473
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004550 2054414 MAG France Europe
Gene Location Start: 4469;  End: 6634  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004550_01297.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 329 1e-79 0.9826388888888888
CE19 457 698 1.4e-26 0.5963855421686747

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 1.43e-62 7 314 81 388
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 2.15e-49 10 311 4 275
Pectinesterase.
PLN02773 PLN02773 3.15e-42 2 314 1 282
pectinesterase
PLN02708 PLN02708 1.28e-40 26 336 258 550
Probable pectinesterase/pectinesterase inhibitor
PLN02990 PLN02990 2.29e-40 10 337 263 562
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34433.1 0.0 2 719 1 719
ATP54718.1 0.0 1 721 1 721
QUC03567.1 0.0 2 712 1 706
QRP39805.1 6.34e-105 10 336 20 349
ASN95501.1 6.34e-105 10 336 20 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3UW0_A 1.02e-27 18 283 44 305
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
1XG2_A 3.59e-27 10 331 7 301
ChainA, Pectinesterase 1 [Solanum lycopersicum]
5C1E_A 1.30e-25 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 2.38e-25 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 7.83e-23 10 331 11 305
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 1.24e-35 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q9LVQ0 1.16e-32 2 314 1 282
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
O81320 2.26e-32 10 328 167 453
Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1
Q9FJ21 9.06e-32 10 310 262 533
Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1
Q8L7Q7 1.20e-30 26 324 306 593
Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000040 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004550_01297.