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CAZyme Information: MGYG000004461_01226
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; ; | |||||||||||
| CAZyme ID | MGYG000004461_01226 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Anti-sigma-I factor RsgI6 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 77627; End: 78961 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 54 | 386 | 4.5e-44 | 0.976897689768977 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00633 | Glyco_10 | 4.96e-39 | 98 | 384 | 3 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 1.01e-26 | 41 | 386 | 18 | 339 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam00331 | Glyco_hydro_10 | 4.81e-26 | 76 | 386 | 22 | 310 | Glycosyl hydrolase family 10. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QMW04637.1 | 9.15e-108 | 18 | 432 | 31 | 434 |
| AVM44415.1 | 4.99e-106 | 21 | 442 | 24 | 438 |
| QIP12711.1 | 8.99e-105 | 22 | 432 | 35 | 433 |
| QHV94149.1 | 1.01e-103 | 21 | 432 | 34 | 433 |
| AEI51978.1 | 9.31e-98 | 14 | 442 | 27 | 439 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7D88_A | 6.46e-27 | 29 | 433 | 55 | 412 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 7D89_A | 5.61e-26 | 29 | 433 | 55 | 412 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 4L4O_A | 2.50e-15 | 71 | 348 | 7 | 301 | Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725] |
| 4PMD_A | 1.38e-14 | 71 | 348 | 7 | 301 | Crystalstructure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose [Caldicellulosiruptor bescii DSM 6725] |
| 4L4P_A | 1.47e-14 | 71 | 348 | 7 | 301 | themutant(E139A) structure in complex with xylotriose [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DH97 | 8.10e-19 | 20 | 434 | 382 | 748 | Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1 |
| P10478 | 2.11e-10 | 124 | 386 | 580 | 832 | Endo-1,4-beta-xylanase Z OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=xynZ PE=1 SV=3 |
| O69230 | 3.77e-09 | 124 | 348 | 431 | 674 | Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1 |
| P45703 | 4.73e-07 | 58 | 348 | 14 | 294 | Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000058 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |