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CAZyme Information: MGYG000004445_00163

You are here: Home > Sequence: MGYG000004445_00163

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; ;
CAZyme ID MGYG000004445_00163
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1047 MGYG000004445_2|CGC1 113828.84 4.6833
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004445 2176712 MAG Israel Asia
Gene Location Start: 56277;  End: 59420  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004445_00163.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 355 563 8.4e-20 0.5753846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.25e-26 299 533 83 323
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 8.15e-08 298 522 67 267
polygalacturonase ADPG
pfam12708 Pectate_lyase_3 2.32e-04 300 337 3 41
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA23464.1 7.05e-123 55 783 84 799
QCD41820.1 9.28e-84 81 727 239 878
ADB48561.1 5.05e-41 289 913 20 603
QGQ94767.1 2.85e-30 306 800 46 533
ADB48560.1 1.04e-22 289 758 20 476

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 6.54e-09 294 535 23 276
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2UVE_A 3.39e-08 299 522 157 405
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8RY29 7.93e-08 298 565 67 336
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000854 0.998250 0.000244 0.000244 0.000197 0.000173

TMHMM  Annotations      download full data without filtering help

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