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CAZyme Information: MGYG000004429_00028

You are here: Home > Sequence: MGYG000004429_00028

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ;
CAZyme ID MGYG000004429_00028
CAZy Family SLH
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
413 MGYG000004429_1|CGC1 44042.77 4.5706
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004429 2352873 MAG Israel Asia
Gene Location Start: 25840;  End: 27081  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004429_00028.

CAZyme Signature Domains help

Family Start End Evalue family coverage
SLH 31 71 4.4e-16 0.9523809523809523

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033190 inl_like_NEAT_1 4.55e-10 32 191 583 741
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395 SLH 7.59e-09 32 72 2 42
S-layer homology domain.
pfam00395 SLH 1.19e-07 93 135 1 42
S-layer homology domain.
NF033190 inl_like_NEAT_1 2.17e-05 42 134 653 743
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395 SLH 0.002 156 194 5 42
S-layer homology domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAU26536.1 1.47e-23 6 198 13 195
AEV68181.1 1.12e-21 29 198 1606 1775
VDN48011.1 2.21e-21 1 198 1 196
QUH25008.1 1.13e-20 2 198 10 199
VDN48012.1 9.32e-20 43 212 43 211

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P38538 3.53e-11 1 194 31 222
Surface layer protein OS=Brevibacillus choshinensis OX=54911 PE=1 SV=1
P06546 8.10e-11 1 194 1 194
Middle cell wall protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=BBR47_54160 PE=4 SV=4
C6CRV0 2.70e-10 22 198 1274 1455
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
Q06852 1.17e-09 50 193 2101 2255
Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2
P38536 1.51e-09 55 204 1705 1857
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000268 0.998915 0.000216 0.000211 0.000204 0.000173

TMHMM  Annotations      download full data without filtering help

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