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CAZyme Information: MGYG000004419_00919

You are here: Home > Sequence: MGYG000004419_00919

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella phocaeensis
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella phocaeensis
CAZyme ID MGYG000004419_00919
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
753 MGYG000004419_36|CGC1 81930.73 4.418
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004419 1852598 MAG Israel Asia
Gene Location Start: 16368;  End: 18629  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004419_00919.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 192 698 6.9e-164 0.9880715705765407

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 8.76e-122 192 698 6 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 3.10e-66 180 718 7 522
Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam07532 Big_4 2.26e-06 99 157 1 59
Bacterial Ig-like domain (group 4). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
COG1331 YyaL 0.001 367 458 412 503
Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only].
pfam03663 Glyco_hydro_76 0.002 383 453 164 249
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASR48105.1 6.00e-209 2 751 6 757
AWY98728.1 2.89e-208 1 751 7 753
QNM13425.1 3.08e-208 3 753 5 756
BAQ31688.1 5.01e-208 1 751 7 769
ASA23792.1 4.36e-206 2 751 6 757

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 1.66e-64 193 753 38 651
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 1.62e-58 193 753 38 651
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
6EX6_A 1.21e-10 318 699 142 546
TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000032 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004419_00919.