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CAZyme Information: MGYG000004414_01029

You are here: Home > Sequence: MGYG000004414_01029

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Agathobacter sp900549895
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Agathobacter; Agathobacter sp900549895
CAZyme ID MGYG000004414_01029
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
419 46939.5 4.4016
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004414 2422277 MAG Israel Asia
Gene Location Start: 15561;  End: 16820  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004414_01029.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 1.49e-15 344 405 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 4.52e-09 335 405 117 183
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 1.80e-08 339 405 39 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam13620 CarboxypepD_reg 2.06e-06 24 113 9 81
Carboxypeptidase regulatory-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VCV21206.1 2.24e-222 10 418 10 418
ASM69598.1 1.52e-211 12 418 15 420
QJU14725.1 1.25e-210 12 418 15 420
QQQ92685.1 1.25e-210 12 418 15 420
ASU27931.1 1.25e-210 12 418 15 420

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000030 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004414_01029.