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CAZyme Information: MGYG000004369_02386

You are here: Home > Sequence: MGYG000004369_02386

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-882 sp000435595
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-882; CAG-882 sp000435595
CAZyme ID MGYG000004369_02386
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1285 MGYG000004369_44|CGC1 136222.18 4.3891
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004369 3090795 MAG Israel Asia
Gene Location Start: 21951;  End: 25808  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004369_02386.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 656 1038 1.3e-124 0.9733333333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 8.21e-07 192 264 8 92
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
pfam00041 fn3 1.94e-05 187 258 2 85
Fibronectin type III domain.
smart00060 FN3 1.86e-04 187 255 3 83
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX44216.1 3.54e-318 89 1058 224 1202
BCJ94249.1 3.30e-297 45 1251 181 1451
ADL35206.1 5.95e-273 73 1038 1450 2444
ACR71158.1 1.08e-245 73 1046 601 1648
AUJ67476.1 1.13e-174 215 1058 28 874

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.96e-41 659 934 18 292
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 3.95e-19 656 919 3 303
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 5.94e-66 298 938 80 643
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6 1.76e-43 659 1028 43 386
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 1.82e-40 659 934 43 317
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P20533 3.02e-06 72 268 456 647
Chitinase A1 OS=Niallia circulans OX=1397 GN=chiA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999978 0.000059 0.000002 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
1259 1281