CAZyme Information: MGYG000004364_00025

Basic Information

• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella
• CAZyme ID: MGYG000004364_00025
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
856	MGYG000004364_1|CGC1	93743.95	4.4365

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004364	1902556	MAG	Israel	Asia

• Gene Location: Start: 30308; End: 32878 Strand: +

Full Sequence      

MAAYDNHVLPFLWLKGEAHETITEYLEQIAGADIREVCLESRTHPEFCRDGWWADLRFII
GECKRLGLKIWLLDDAHFPTGYANGALAGEDVDPALKKTVLKHHTVTVVGPQPSTVIKLG
NLMDPTEHFVGAAGFDAAGVPLDLELAVEQTEGGTPACLRFDAPAGVTTLELYVTSQKTG
FRDEYINMVDADSCRMLINAVYEPTFEHLGDEFGKTILGFFTDEPGFMNEKGATLEDAST
SSFIGRGDMALPWSDELARRLHEALGANWLSELRELWTRDPAGARVRHTYMDIATQLYRA
CFDEQIGDWCRERGVMHIGHVIEDKSCHARLGQGAGHYFRAVAGQDMAGIDVVINQLAPG
IDHGPYSYFHGTWNMEFFTYALAKLGSSAARLDPKKQGRCMAEVFGAFGWHEGLREMKWI
ADHMLVRGVNWFTPHAFSMAPFPDWDCPPHFYAHGNNPQWPHFGQLMSYMNRTATLLSGG
CATRPVAILYHADAEWAGSAMPIERVAAELTRAQIDFDFVPAEAFEDKSRYEVSIADGLL
CVNNCRYQSFVMPGATFIGAETAQAVRRMIDAGVMVLAVDEVPSALYDADVLVELGELAA
TQLADMAGVLASAGLQTVVTDTPQPWLRALRYERAGETYVMLVNEHPRERIDCTVALATG
ERLCGTRLDLLNGIEPVAFDGALELAPFESCFVVLEASSEDAPGDGAIDADASLDLRIEG
PWTVALSPAGSNDAFGEAQELEHLCDLTTDLFTGTCGTYRYHASFELANDLADATIDLGD
VYEVATLTLDGRSLGTRICPPYRFAADALSAGAHELTVDVINTLDHAIPDIFALTEPVAP
SGILGPVTLCRQNLPK

Enzyme Prediction     

No EC number prediction in MGYG000004364_00025.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	19	850	1.8e-62	0.9648058252427184

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	0.002	402	623	579	796	alpha-L-rhamnosidase.
cd03143	A4_beta-galactosidase_middle_domain	0.009	486	578	1	85	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATP54541.1	0.0	1	856	1	855
AZH68834.1	0.0	4	847	13	859
QNM10672.1	1.50e-290	4	849	13	832
AGF57028.1	1.84e-236	4	849	12	845
APQ61832.1	8.48e-191	5	849	13	867

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000049	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004364_00025.