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CAZyme Information: MGYG000004317_01567

You are here: Home > Sequence: MGYG000004317_01567

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira sp900316325
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900316325
CAZyme ID MGYG000004317_01567
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1390 MGYG000004317_17|CGC1 149931.93 4.5278
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004317 2482422 MAG Israel Asia
Gene Location Start: 54892;  End: 59064  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 933 1334 3.8e-105 0.976

CDD Domains      help

MGYG000004317_01567 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADD02972.1 8.60e-209 8 1331 5 1263
ADQ05619.1 2.03e-205 52 1331 58 1280
BAC87940.1 3.09e-196 8 1299 5 1226
AZP04483.1 5.03e-196 52 1331 70 1277
ANX00231.1 6.06e-196 8 1299 5 1226

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 2.31e-32 936 1254 18 340
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 2.98e-13 936 1223 6 325
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 1.21e-51 597 1204 34 626
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A7 1.97e-31 936 1254 43 365
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P0C1A6 3.57e-31 936 1222 43 328
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000242 0.999115 0.000156 0.000177 0.000148 0.000136

TMHMM  Annotations      download full data without filtering help

start end
9 28
1361 1383