You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004308_01504
You are here: Home > Sequence: MGYG000004308_01504
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-238 sp000435615 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Anaerovoracaceae; CAG-238; CAG-238 sp000435615 | |||||||||||
| CAZyme ID | MGYG000004308_01504 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 13810; End: 21276 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 3.60e-73 | 1153 | 1681 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 8.96e-28 | 1822 | 2011 | 439 | 635 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| cd18011 | DEXDc_RapA | 6.32e-11 | 1627 | 1875 | 1 | 173 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| smart00487 | DEXDc | 6.20e-10 | 1625 | 1728 | 7 | 110 | DEAD-like helicases superfamily. |
| pfam04851 | ResIII | 4.65e-09 | 1624 | 1713 | 1 | 100 | Type III restriction enzyme, res subunit. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 0.0 | 861 | 2416 | 1548 | 3186 |
| QIW86704.1 | 0.0 | 861 | 2416 | 1616 | 3254 |
| QIW86628.1 | 0.0 | 861 | 2416 | 1616 | 3254 |
| AXF51455.1 | 6.28e-316 | 861 | 2416 | 1782 | 3423 |
| AEY69616.1 | 5.56e-315 | 861 | 2416 | 1689 | 3330 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 8.02e-36 | 944 | 2275 | 87 | 1635 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000063 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |