logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004290_00357

You are here: Home > Sequence: MGYG000004290_00357

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900549305
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900549305
CAZyme ID MGYG000004290_00357
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
625 MGYG000004290_10|CGC1 69751.5 7.0788
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004290 3325933 MAG China Asia
Gene Location Start: 28871;  End: 30748  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004290_00357.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 27 580 6.8e-187 0.9963503649635036

CDD Domains      help

MGYG000004290_00357 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU94640.1 3.95e-248 1 612 1 614
QQT77621.1 1.61e-242 23 604 24 606
EDM21147.1 1.61e-242 23 604 24 606
ASM65827.1 1.61e-242 23 604 24 606
QRP57135.1 1.61e-242 23 604 24 606

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 4.77e-75 27 583 28 598
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 2.51e-74 27 583 28 598
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89ZX0 1.73e-240 23 611 24 613
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
Q5L7M8 1.82e-115 17 604 16 603
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
Q64MU6 3.09e-113 17 604 16 603
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1
Q64XV2 2.61e-104 1 577 1 593
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaB PE=3 SV=1
Q5LGZ8 3.67e-104 1 577 1 593
Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000274 0.999119 0.000156 0.000173 0.000146 0.000147

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004290_00357.