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CAZyme Information: MGYG000004285_01768
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1670 sp900546215 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Anaerotignaceae; UMGS1670; UMGS1670 sp900546215 | |||||||||||
| CAZyme ID | MGYG000004285_01768 | |||||||||||
| CAZy Family | SLH | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 31898; End: 35605 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| SLH | 29 | 68 | 9.2e-20 | 0.9523809523809523 |
| SLH | 86 | 127 | 2.7e-16 | 0.9761904761904762 |
| CBM54 | 441 | 510 | 8e-16 | 0.5964912280701754 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5492 | YjdB | 6.13e-19 | 641 | 792 | 178 | 320 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| NF033190 | inl_like_NEAT_1 | 8.69e-15 | 33 | 188 | 588 | 743 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| COG5492 | YjdB | 6.59e-13 | 1015 | 1150 | 133 | 270 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| COG5492 | YjdB | 6.55e-12 | 958 | 1130 | 156 | 321 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| NF033190 | inl_like_NEAT_1 | 9.29e-10 | 71 | 231 | 567 | 728 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGU00318.1 | 2.18e-64 | 30 | 1048 | 38 | 1000 |
| BAU26536.1 | 3.07e-64 | 22 | 405 | 26 | 437 |
| CCP24966.1 | 4.46e-61 | 25 | 494 | 34 | 519 |
| AEE90469.1 | 4.46e-61 | 25 | 494 | 34 | 519 |
| AMJ40768.1 | 7.14e-61 | 2 | 413 | 8 | 420 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6BT4_A | 2.69e-09 | 86 | 183 | 26 | 124 | Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis] |
| 3PYW_A | 2.74e-09 | 86 | 183 | 5 | 103 | Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis] |
| 5GZT_A | 9.98e-06 | 442 | 490 | 59 | 107 | CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q06852 | 1.23e-17 | 27 | 197 | 2088 | 2264 | Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2 |
| Q06853 | 9.76e-17 | 48 | 197 | 483 | 638 | Cell surface glycoprotein 2 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=Cthe_3079 PE=1 SV=1 |
| P38535 | 1.42e-16 | 29 | 193 | 909 | 1077 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| P33747 | 2.29e-16 | 639 | 791 | 32 | 185 | Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2 |
| P94217 | 4.78e-16 | 28 | 297 | 35 | 301 | S-layer protein EA1 OS=Bacillus anthracis OX=1392 GN=eag PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000382 | 0.998649 | 0.000225 | 0.000269 | 0.000242 | 0.000198 |