logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004234_01704

You are here: Home > Sequence: MGYG000004234_01704

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massiliomicrobiota sp002160815
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelatoclostridiaceae; Massiliomicrobiota; Massiliomicrobiota sp002160815
CAZyme ID MGYG000004234_01704
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
613 68823.58 5.5286
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004234 2339347 MAG United Kingdom Europe
Gene Location Start: 1493;  End: 3334  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004234_01704.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 321 439 3.7e-18 0.984375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd14256 Dockerin_I 5.29e-15 555 611 1 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
COG4193 LytD 8.63e-14 269 434 52 224
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam00404 Dockerin_1 2.56e-12 556 611 1 56
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.
pfam01832 Glucosaminidase 8.98e-12 322 394 1 84
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
smart00047 LYZ2 2.95e-10 310 434 1 135
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUN13370.1 0.0 1 586 1 588
QNM11023.1 1.28e-138 44 586 49 605
BCT44532.1 4.25e-101 32 584 36 604
QSI26463.1 4.06e-91 131 584 88 556
QJA02388.1 6.85e-89 133 584 90 558

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 5.09e-20 197 434 75 278
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 9.22e-19 197 434 443 646
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 9.96e-19 197 434 487 690
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.050717 0.939095 0.009109 0.000381 0.000318 0.000353

TMHMM  Annotations      download full data without filtering help

start end
5 27