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CAZyme Information: MGYG000004085_00871

You are here: Home > Sequence: MGYG000004085_00871

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UMGS1253; UMGS1253;
CAZyme ID MGYG000004085_00871
CAZy Family CBM85
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
743 83442.91 4.314
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004085 2144710 MAG United Kingdom Europe
Gene Location Start: 67078;  End: 69309  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004085_00871.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 380 669 9.5e-61 0.9735973597359736
CBM85 187 318 1.7e-32 0.9848484848484849

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 1.11e-38 433 664 16 260
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 1.77e-37 387 667 12 305
Glycosyl hydrolase family 10.
pfam07833 Cu_amine_oxidN1 7.77e-34 50 142 1 93
Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.
COG3693 XynA 1.33e-31 408 662 52 330
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam07833 Cu_amine_oxidN1 6.96e-09 112 146 1 35
Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCW34445.1 1.22e-112 160 717 23 579
QDU61652.1 7.63e-106 191 726 71 614
BAM03104.1 1.23e-96 161 719 23 584
ACB76489.1 2.99e-96 188 723 50 601
QDU72038.1 1.15e-95 174 727 47 605

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D88_A 3.36e-50 338 712 39 407
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
7D89_A 1.52e-48 338 712 39 407
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
6FHE_A 3.84e-25 382 653 18 315
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
1NQ6_A 3.70e-22 372 663 1 294
CrystalStructure of the catalytic domain of xylanase A from Streptomyces halstedii JM8 [Streptomyces halstedii]
3W24_A 2.14e-21 382 670 14 326
Thehigh-resolution crystal structure of TsXylA, intracellular xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485 [Thermoanaerobacterium saccharolyticum JW/SL-YS485]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DH97 3.48e-42 342 717 379 748
Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
Q84WT5 2.33e-22 342 640 167 472
Endo-1,4-beta-xylanase 5-like OS=Arabidopsis thaliana OX=3702 GN=At4g33820 PE=2 SV=1
F4JG10 3.74e-21 350 702 372 723
Endo-1,4-beta-xylanase 3 OS=Arabidopsis thaliana OX=3702 GN=XYN3 PE=2 SV=1
I1S3T9 1.86e-20 388 669 37 324
Endo-1,4-beta-xylanase C OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLC PE=1 SV=1
P36917 3.72e-20 382 669 363 674
Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004063 0.980967 0.014122 0.000313 0.000258 0.000246

TMHMM  Annotations      download full data without filtering help

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