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CAZyme Information: MGYG000004075_00113

You are here: Home > Sequence: MGYG000004075_00113

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS1591;
CAZyme ID MGYG000004075_00113
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
676 76903 5.1182
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004075 2841804 MAG United Kingdom Europe
Gene Location Start: 121856;  End: 123886  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004075_00113.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 233 666 2.6e-62 0.8888888888888888
CBM67 11 153 8e-19 0.8579545454545454

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 5.68e-18 309 624 1 339
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408 GDB1 0.001 392 559 319 513
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
PRK09525 lacZ 0.002 79 98 171 190
beta-galactosidase.
pfam02837 Glyco_hydro_2_N 0.003 26 115 67 150
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDH54696.1 4.06e-107 10 667 21 686
QDU71528.1 7.38e-106 8 672 6 694
QUT48047.1 3.62e-103 28 664 43 702
QNL36670.1 3.93e-102 10 667 21 686
BBD46122.1 1.63e-101 28 644 27 650

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 2.51e-20 176 641 392 893
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004075_00113.