dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000003964_01053

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Basic Information help

Species

UBA1740 sp004558975

Lineage

Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; UBA1740; UBA1740 sp004558975

CAZyme ID

MGYG000003964_01053

CAZy Family

CBM67

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
728		82260.82	4.9572

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003964	1589582	MAG	United Kingdom	Europe

Gene Location

Start: 19936; End: 22122 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000003964_01053.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH78	215	704	1.4e-87	0.9742063492063492
CBM67	8	145	1e-22	0.7386363636363636

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	6.08e-14	325	638	14	338	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408	GDB1	9.57e-07	374	677	304	634	Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
pfam17390	Bac_rhamnosid_C	1.70e-05	648	709	2	66	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam02837	Glyco_hydro_2_N	2.62e-04	34	97	83	144	Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK09525	lacZ	4.79e-04	45	87	153	190	beta-galactosidase.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBH24613.1	1.27e-127	11	725	21	803
AZN43562.1	2.70e-117	3	709	16	799
QTH43327.1	6.43e-117	14	722	24	796
QNK59208.1	2.91e-116	30	709	33	757
ALS28317.1	1.52e-115	20	709	35	780

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2OKX_A	2.88e-43	260	709	476	944	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
3CIH_A	2.23e-16	215	681	196	674	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000091	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000003964_01053.