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CAZyme Information: MGYG000003958_02001

You are here: Home > Sequence: MGYG000003958_02001

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp900545715
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900545715
CAZyme ID MGYG000003958_02001
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
529 59593.67 7.0602
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003958 2427590 MAG United Kingdom Europe
Gene Location Start: 4958;  End: 6547  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.38

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 28 526 7.6e-154 0.9896694214876033

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 5.53e-113 30 389 7 355
O-Glycosyl hydrolase family 30.
COG5520 XynC 1.53e-13 1 527 5 427
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189 Glyco_hydro_30C 0.002 435 488 3 54
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGT72500.1 1.04e-119 25 501 40 517
BCS84534.1 5.11e-119 35 502 33 504
VEH15029.1 9.61e-119 13 528 11 527
QIK59847.1 2.74e-118 26 529 40 533
QNT66374.1 2.95e-118 28 529 28 529

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 9.15e-85 31 529 10 497
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
4FMV_A 4.02e-13 24 527 2 385
CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]
5CXP_A 6.85e-12 26 527 5 386
X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824]
6IUJ_A 8.37e-10 6 509 6 453
ChainA, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
7O0E_A 1.32e-08 369 527 296 446
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 7.61e-08 369 527 320 470
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000682 0.730186 0.268246 0.000361 0.000273 0.000229

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003958_02001.