CAZyme Information: MGYG000003958_01171

Basic Information

• Species: CAG-312 sp900545715
• Lineage: Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900545715
• CAZyme ID: MGYG000003958_01171
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
746	MGYG000003958_3|CGC4	83179	8.8913

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003958	2427590	MAG	United Kingdom	Europe

• Gene Location: Start: 389908; End: 392148 Strand: -

Full Sequence      

MKKISILLLVSIIAIFGCSEDTSFNDSNGKAKSLEDSKLNAVENTPKNSAAAAPVKGVSK
LNVMLDEDFEGDTSKFTKLVGKGIALKFVSGDEAISGKKSLCLDSMGSTNEWILAAELNK
SMRFKPGNVYVVEFKYNLLKSLNQSSDNYVSMVGDKGEFYGRNLFASAPGQKGNVKLYFM
IPSDSNGAAFRFSSRWGCKTIIDDLKITHAEGINADSWITKSDAFIGMRKTPINQNMFDI
KNPSYYLPKDKYFPMVDELGQFKHVEWEGKARSVEDLKKQIEEENRYNESRPDIAGRDEF
GGLANSASGAPKTPGFTTAKVGGKWYFRDPDGNLFWSIGVTCVGAFESTPITDREFYFEK
IDPAYVSKSRGFKPGTTYHNREIKTYALGRRNIELKYGKDGVANYWKIAAKRLKKWGLNT
IGAWSSATVMKSNTVPFTVYIQSAGTVPLNTKRKLFALWGNMQDYFAPTFAEKTAERVKK
YSGLLNLKYCIGAFVDNEISWQRKMGVTALAVLSCPATQPAKIEMQKMLAKKYGTVAELN
KVWKSNYSDWSDFLARTDFEPKMENAKDDLLAYEKLFLEHYFKVCRDAVKAACPKALYLG
CRFMTVENELTARAAYDICDVVSCNIYRSDVSFYAPPPGAKDKPMIIGEFHIGRIDKGSP
YGGLLEVPNAKEAAEAYKKYMISAIENPNIVGAHWFQWQDMFVTGRGDGANATCGFVSVT
DNPDYALADACREVASELYKIRAEAK

Enzyme Prediction     

No EC number prediction in MGYG000003958_01171.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	248	739	5e-106	0.7840735068912711

CDD Domains     

MGYG000003958_01171 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QDV65278.1	5.22e-106	248	742	204	696
ASV75458.1	3.01e-104	253	742	194	681
ART28001.1	6.54e-97	250	742	191	683
AGY53973.1	8.71e-97	247	744	192	686
AXP07844.1	2.50e-96	240	742	181	685

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4BQ2_A	1.55e-62	230	746	180	750	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	4.01e-62	230	746	180	750	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A	1.04e-59	153	742	125	762	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5Z6P_A	6.66e-52	255	742	222	762	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	3.49e-56	230	742	402	952	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839	5.22e-50	217	739	357	913	Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	1.000053	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003958_01171.