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CAZyme Information: MGYG000003936_00666
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; V9D3004; | |||||||||||
| CAZyme ID | MGYG000003936_00666 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1325; End: 2566 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 74 | 409 | 1.9e-89 | 0.9966996699669967 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 8.03e-103 | 75 | 408 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 1.18e-87 | 116 | 406 | 1 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 4.11e-70 | 95 | 406 | 46 | 337 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADL33823.1 | 1.44e-80 | 73 | 410 | 1 | 338 |
| BCS82260.1 | 1.59e-79 | 67 | 409 | 62 | 416 |
| CAA43712.1 | 6.84e-79 | 73 | 410 | 1 | 338 |
| AZT91389.1 | 7.70e-77 | 67 | 409 | 62 | 416 |
| ADU22101.1 | 2.19e-76 | 74 | 412 | 53 | 384 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6D5C_A | 2.90e-66 | 69 | 409 | 17 | 350 | Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii] |
| 5OFJ_A | 4.21e-66 | 74 | 410 | 10 | 339 | Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725] |
| 3W24_A | 5.44e-66 | 75 | 411 | 9 | 328 | Thehigh-resolution crystal structure of TsXylA, intracellular xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485 [Thermoanaerobacterium saccharolyticum JW/SL-YS485] |
| 5OFK_A | 3.28e-65 | 74 | 410 | 10 | 339 | Crystalstructure of CbXyn10C variant E140Q/E248Q complexed with xyloheptaose [Caldicellulosiruptor bescii DSM 6725],5OFL_A Crystal structure of CbXyn10C variant E140Q/E248Q complexed with cellohexaose [Caldicellulosiruptor bescii DSM 6725] |
| 3W25_A | 4.24e-65 | 75 | 411 | 9 | 328 | Thehigh-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3W26_A The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylotriose [Thermoanaerobacterium saccharolyticum JW/SL-YS485] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P26223 | 1.37e-79 | 73 | 410 | 1 | 338 | Endo-1,4-beta-xylanase B OS=Butyrivibrio fibrisolvens OX=831 GN=xynB PE=3 SV=1 |
| P23557 | 1.55e-68 | 116 | 409 | 1 | 301 | Putative endo-1,4-beta-xylanase OS=Caldicellulosiruptor saccharolyticus OX=44001 PE=3 SV=1 |
| Q60037 | 2.42e-64 | 74 | 406 | 369 | 689 | Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1 |
| Q60042 | 5.50e-63 | 74 | 406 | 365 | 685 | Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1 |
| P36917 | 9.26e-62 | 75 | 411 | 358 | 677 | Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000003 | 1.000035 | 0.000000 | 0.000000 | 0.000000 |
