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CAZyme Information: MGYG000003927_02073

You are here: Home > Sequence: MGYG000003927_02073

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminiclostridium_E;
CAZyme ID MGYG000003927_02073
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1934 220087.7 4.9872
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003927 2497009 MAG China Asia
Gene Location Start: 5605;  End: 11409  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003927_02073.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 4.53e-59 642 1176 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 9.52e-25 1321 1510 441 637
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG0553 HepA 5.37e-09 1065 1687 286 848
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair].
COG0827 YtxK 1.35e-08 506 638 222 364
Adenine-specific DNA methylase [Replication, recombination and repair].
cd18793 SF2_C_SNF 1.41e-08 1565 1658 41 135
C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 9.27e-318 352 1908 1558 3186
QIW86704.1 1.18e-315 352 1908 1626 3254
QIW86628.1 1.18e-315 352 1908 1626 3254
AXF51455.1 9.03e-299 352 1908 1792 3423
AEY69616.1 3.73e-298 352 1908 1699 3330

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 1.56e-31 354 1742 44 1608
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000074 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003927_02073.