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CAZyme Information: MGYG000003926_01410

You are here: Home > Sequence: MGYG000003926_01410

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rikenella microfusus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Rikenella; Rikenella microfusus
CAZyme ID MGYG000003926_01410
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
694 77609.87 5.8287
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003926 2402156 MAG China Asia
Gene Location Start: 744;  End: 2828  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003926_01410.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 54 681 1.1e-114 0.7167553191489362

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 2.77e-110 37 671 17 662
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 3.32e-100 41 686 34 704
beta-galactosidase.
COG3250 LacZ 3.61e-83 64 667 15 611
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 7.09e-45 356 579 1 259
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10150 PRK10150 5.34e-36 147 483 69 414
beta-D-glucuronidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CDN31146.1 2.12e-210 1 694 1 677
CDN30860.1 7.83e-147 30 671 31 691
ABR42015.1 9.65e-147 10 671 16 714
QRO17774.1 1.01e-146 10 671 18 716
QJE28487.1 1.90e-146 10 671 16 714

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 2.63e-83 28 673 11 683
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
6S6Z_A 2.54e-82 27 671 7 653
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 2.57e-82 27 671 8 654
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3BGA_A 1.85e-80 28 670 14 679
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3VD3_A 2.01e-72 41 569 62 604
E.coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_B E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_C E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_D E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD4_A E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_B E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_C E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_D E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 9.76e-86 40 662 37 687
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q56307 1.41e-81 27 671 8 654
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
P81650 5.80e-81 27 577 16 582
Beta-galactosidase OS=Pseudoalteromonas haloplanktis OX=228 GN=lacZ PE=1 SV=2
Q6LL68 8.11e-78 64 570 49 571
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
A5F5U6 3.46e-76 27 570 16 574
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000345 0.204854 0.794479 0.000111 0.000115 0.000097

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003926_01410.