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CAZyme Information: MGYG000003926_01289

You are here: Home > Sequence: MGYG000003926_01289

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rikenella microfusus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Rikenella; Rikenella microfusus
CAZyme ID MGYG000003926_01289
CAZy Family GH35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
771 87209.1 6.4671
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003926 2402156 MAG China Asia
Gene Location Start: 101;  End: 2416  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003926_01289.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH35 31 342 1e-119 0.993485342019544

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01301 Glyco_hydro_35 1.37e-136 31 342 2 316
Glycosyl hydrolases family 35.
PLN03059 PLN03059 3.21e-55 31 651 37 757
beta-galactosidase; Provisional
COG1874 GanA 2.36e-51 29 629 6 631
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam00754 F5_F8_type_C 1.12e-05 703 763 14 70
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
EDO09322.1 0.0 22 771 30 777
QRQ59141.1 0.0 22 771 28 775
ALJ49196.1 0.0 22 771 28 775
SCV08614.1 0.0 22 771 30 777
QIU94743.1 0.0 2 771 7 774

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6EON_A 3.29e-197 4 768 7 777
GalactanaseBT0290 [Bacteroides thetaiotaomicron VPI-5482]
3D3A_A 1.06e-158 24 600 8 590
Crystalstructure of a beta-galactosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
4MAD_A 1.33e-146 28 606 21 600
ChainA, Beta-galactosidase [Niallia circulans],4MAD_B Chain B, Beta-galactosidase [Niallia circulans]
7KDV_A 3.14e-129 23 584 17 607
ChainA, Beta-galactosidase [Mus musculus],7KDV_C Chain C, Beta-galactosidase [Mus musculus],7KDV_E Chain E, Beta-galactosidase [Mus musculus],7KDV_G Chain G, Beta-galactosidase [Mus musculus],7KDV_I Chain I, Beta-galactosidase [Mus musculus],7KDV_K Chain K, Beta-galactosidase [Mus musculus]
4E8C_A 2.89e-126 23 599 3 587
Crystalstructure of streptococcal beta-galactosidase in complex with galactose [Streptococcus pneumoniae TIGR4],4E8C_B Crystal structure of streptococcal beta-galactosidase in complex with galactose [Streptococcus pneumoniae TIGR4],4E8D_A Crystal structure of streptococcal beta-galactosidase [Streptococcus pneumoniae TIGR4],4E8D_B Crystal structure of streptococcal beta-galactosidase [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48982 2.08e-157 16 566 23 573
Beta-galactosidase OS=Xanthomonas manihotis OX=43353 GN=bga PE=1 SV=1
P23780 7.87e-128 23 584 34 624
Beta-galactosidase OS=Mus musculus OX=10090 GN=Glb1 PE=1 SV=1
Q3UPY5 1.04e-124 31 587 54 618
Beta-galactosidase-1-like protein 2 OS=Mus musculus OX=10090 GN=Glb1l2 PE=1 SV=1
Q9TRY9 3.97e-123 25 585 36 624
Beta-galactosidase OS=Canis lupus familiaris OX=9615 GN=GLB1 PE=1 SV=3
Q8IW92 4.44e-123 25 581 48 612
Beta-galactosidase-1-like protein 2 OS=Homo sapiens OX=9606 GN=GLB1L2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000233 0.999144 0.000154 0.000148 0.000144 0.000132

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003926_01289.